PDB entry 2f5a
View 2f5a on RCSB PDB site
Description: crystal structure of fab' from the hiv-1 neutralizing antibody 2f5
Class: immunoglobulin
Keywords: fab, hiv-1 neutralization, gp41, immunoglobulin
Deposited on
1999-04-08, released
2003-07-15
The last revision prior to the SCOPe 2.04 freeze date was dated
2009-12-29, with a file datestamp of
2009-12-24.
Experiment type: XRAY
Resolution: 2.05 Å
R-factor: 0.235
AEROSPACI score: 0.39
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'H':
Compound: protein (antibody 2f5 (heavy chain))
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d2f5ah1, d2f5ah2 - Chain 'L':
Compound: protein (antibody 2f5 (light chain))
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d2f5al1, d2f5al2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'H':
Sequence, based on SEQRES records: (download)
>2f5aH (H:)
ritlkesgpplvkptqtltltcsfsgfslsdfgvgvgwirqppgkalewlaiiysdddkr
yspslntrltitkdtsknqvvlvmtrvspvdtatyfcahrrgpttlaaaaaaagpvnamd
vwgqgitvtisststkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgalts
gvhtfpavlqssglyslssvvtvpssslgtqtytcnvnhkpsntkvdkrvep
Sequence, based on observed residues (ATOM records): (download)
>2f5aH (H:)
ritlkesgpplvkptqtltltcsfsgfslsdfgvgvgwirqppgkalewlaiiysdddkr
yspslntrltitkdtsknqvvlvmtrvspvdtatyfcahrrgpttlaaaaaaagpvnamd
vwgqgitvtisststkgpsvfplapssggtaalgclvkdyfpepvtvswnsgaltsgvht
fpavlqssglyslssvvtvpssslgtqtytcnvnhkpsntkvdkrvep
- Chain 'L':
Sequence; same for both SEQRES and ATOM records: (download)
>2f5aL (L:)
alqltqspsslsasvgdrititcrasqgvtsalawyrqkpgsppqlliydasslesgvps
rfsgsgsgteftltistlrpedfatyycqqlhfyphtfgggtrvdvrrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyecevthqglsspvtksfnrge