PDB entry 2ef9
View 2ef9 on RCSB PDB site
Description: Structural and mechanistic changes along an engineered path from metallo to non-metallo KDO8P synthase
Class: transferase
Keywords: kdo, kdo8p, kdo8ps, pep, a5p, transferase
Deposited on
2007-02-22, released
2007-04-24
The last revision prior to the SCOPe 2.03 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.188
AEROSPACI score: 0.46
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: 2-dehydro-3-deoxyphosphooctonate aldolase
Species: Aquifex aeolicus [TaxId:63363]
Database cross-references and differences (RAF-indexed):
- Uniprot O66496
- engineered (9-10)
- engineered (234)
- engineered (236)
Domains in SCOPe 2.03: d2ef9a_ - Chain 'B':
Compound: 2-dehydro-3-deoxyphosphooctonate aldolase
Species: Aquifex aeolicus [TaxId:63363]
Database cross-references and differences (RAF-indexed):
- Uniprot O66496
- engineered (9-10)
- engineered (234)
- engineered (236)
Domains in SCOPe 2.03: d2ef9b_ - Heterogens: PEP, A5P, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2ef9A (A:)
mekflviagmnaieseelllkvgeeikrlsekfkevefvfkssfdkanrssihsfrghgl
eygvkalrkvkeefglkittdiheswqaepvaevadiiqipaflcrqtdlllaaaktgra
vnvkkgqflapwdtknvveklkfggakeiyltergttfgynnlvvdfrslpimkqwakvi
ydathsvqlpgglgdksggmrefifpliraavavgcdgvfmethpepekalsdaptalpl
sqlegiieaileirevaskyyetipvk
Sequence, based on observed residues (ATOM records): (download)
>2ef9A (A:)
ekflviagmnaieseelllkvgeeikrlsekfkevefvfkssfdkanrssihsfrghgle
ygvkalrkvkeefglkittdiheswqaepvaevadiiqipaflcrqtdlllaaaktgrav
nvkkgqflapwdtknvveklkfggakeiyltergttfgynnlvvdfrslpimkqwakviy
dathsvqlpgglgdksggmrefifpliraavavgcdgvfmethpepekalsdaptalpls
qlegiieaileirevaskyyeti
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2ef9B (B:)
mekflviagmnaieseelllkvgeeikrlsekfkevefvfkssfdkanrssihsfrghgl
eygvkalrkvkeefglkittdiheswqaepvaevadiiqipaflcrqtdlllaaaktgra
vnvkkgqflapwdtknvveklkfggakeiyltergttfgynnlvvdfrslpimkqwakvi
ydathsvqlpgglgdksggmrefifpliraavavgcdgvfmethpepekalsdaptalpl
sqlegiieaileirevaskyyetipvk
Sequence, based on observed residues (ATOM records): (download)
>2ef9B (B:)
kflviagmnaieseelllkvgeeikrlsekfkevefvfkssfdkanrssihsfrghgley
gvkalrkvkeefglkittdiheswqaepvaevadiiqipaflcrqtdlllaaaktgravn
vkkgqflapwdtknvveklkfggakeiyltergttfgynnlvvdfrslpimkqwakviyd
athsvqlpgglgdksggmrefifpliraavavgcdgvfmethpepekalsdaptalplsq
legiieaileirevaskyyeti