PDB entry 2dth
View 2dth on RCSB PDB site
Description: The Crystal Structure of the Orthorhombic Form of Biotin Protein Ligase From Pyrococcus Horikoshii OT3 in Complex with Biotin and ADP
Class: ligase
Keywords: Biotin Biosynthesis, Dimer, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, LIGASE
Deposited on
2006-07-12, released
2007-01-12
The last revision prior to the SCOPe 2.06 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: 0.24
AEROSPACI score: 0.42
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: 235aa long hypothetical biotin--[acetyl-CoA-carboxylase] ligase
Species: Pyrococcus horikoshii [TaxId:70601]
Gene: birA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2dtha1, d2dtha2 - Chain 'B':
Compound: 235aa long hypothetical biotin--[acetyl-CoA-carboxylase] ligase
Species: Pyrococcus horikoshii [TaxId:70601]
Gene: birA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2dthb1, d2dthb2 - Heterogens: ADP, BTN, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>2dthA (A:)
mlglktsiigrrviyfqeitstnefaktsyleegtvivadkqtmghgrlnrkwespeggl
wlsivlspkvpqkdlpkivflgavgvvetlkefsidgrikwpndvlvnykkiagvlvegk
gdkivlgiglnvnnkvpngatsmklelgsevpllsvfrslitnldrlylnflknpmdiln
lvrdnmilgvrvkilgdgsfegiaediddfgrliirldsgevkkviygdvslrfl
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>2dthB (B:)
mlglktsiigrrviyfqeitstnefaktsyleegtvivadkqtmghgrlnrkwespeggl
wlsivlspkvpqkdlpkivflgavgvvetlkefsidgrikwpndvlvnykkiagvlvegk
gdkivlgiglnvnnkvpngatsmklelgsevpllsvfrslitnldrlylnflknpmdiln
lvrdnmilgvrvkilgdgsfegiaediddfgrliirldsgevkkviygdvslrfl