PDB entry 2dqf

View 2dqf on RCSB PDB site
Description: Crystal structure of hyhel-10 FV mutant (y33ay53a) complexed with hen egg lysozyme
Class: immune system/hydrolase
Keywords: antigen-antibody complex, mutant, immune system/hydrolase complex
Deposited on 2006-05-25, released 2007-01-23
The last revision prior to the SCOP 1.75 freeze date was dated 2008-05-20, with a file datestamp of 2008-05-16.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.224
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: lysozyme binding Ig kappa chain V23-J2 region
    Species: MUS MUSCULUS
    Gene:
    Database cross-references and differences (RAF-indexed):
    • PDB 2DQF (0-106)
    Domains in SCOP 1.75: d2dqfa1
  • Chain 'B':
    Compound: Ig VH,anti-lysozyme
    Species: MUS MUSCULUS
    Gene:
    Database cross-references and differences (RAF-indexed):
    • PDB 2DQF (0-113)
    Domains in SCOP 1.75: d2dqfb1
  • Chain 'C':
    Compound: Lysozyme C
    Species: GALLUS GALLUS
    Gene:
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2dqfc1
  • Chain 'D':
    Compound: lysozyme binding Ig kappa chain V23-J2 region
    Species: MUS MUSCULUS
    Gene:
    Database cross-references and differences (RAF-indexed):
    • PDB 2DQF (0-106)
    Domains in SCOP 1.75: d2dqfd1
  • Chain 'E':
    Compound: Ig VH,anti-lysozyme
    Species: MUS MUSCULUS
    Gene:
    Database cross-references and differences (RAF-indexed):
    • PDB 2DQF (0-113)
    Domains in SCOP 1.75: d2dqfe1
  • Chain 'F':
    Compound: Lysozyme C
    Species: GALLUS GALLUS
    Gene:
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2dqff1
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2dqfA (A:)
    divltqspatlsvtpgnsvslscrasqsignnlhwyqqkshesprllikyasqsisgips
    rfsgsgsgtdftlsinsvetedfgmyfcqqsnswpytfgggtkleik
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2dqfB (B:)
    dvqlqesgpslvkpsqtlsltcsvtgdsitsdawswirkfpgnrleymgyvsasgstyyn
    pslksrisitrdtsknqyyldlnsvttedtatyycanwdgdywgqgtlvtvsaa
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2dqfC (C:)
    kvfgrcelaaamkrhgldnyrgyslgnwvcaakfesnfntqatnrntdgstdygilqins
    rwwcndgrtpgsrnlcnipcsallssditasvncakkivsdgngmnawvawrnrckgtdv
    qawirgcrl
    

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2dqfD (D:)
    divltqspatlsvtpgnsvslscrasqsignnlhwyqqkshesprllikyasqsisgips
    rfsgsgsgtdftlsinsvetedfgmyfcqqsnswpytfgggtkleik
    

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2dqfE (E:)
    dvqlqesgpslvkpsqtlsltcsvtgdsitsdawswirkfpgnrleymgyvsasgstyyn
    pslksrisitrdtsknqyyldlnsvttedtatyycanwdgdywgqgtlvtvsaa
    

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2dqfF (F:)
    kvfgrcelaaamkrhgldnyrgyslgnwvcaakfesnfntqatnrntdgstdygilqins
    rwwcndgrtpgsrnlcnipcsallssditasvncakkivsdgngmnawvawrnrckgtdv
    qawirgcrl