PDB entry 2dpp
View 2dpp on RCSB PDB site
Description: Crystal structure of thermostable Bacillus sp. RAPc8 nitrile hydratase
Class: lyase
Keywords: nitrile hydratase, cobalt, oxidised cys, LYASE
Deposited on
2006-05-12, released
2007-05-22
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.52 Å
R-factor: 0.202
AEROSPACI score: 0.31
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Nitrile hydratase alpha subunit
Species: Bacillus sp. RAPc8 [TaxId:218609]
Database cross-references and differences (RAF-indexed):
- Uniprot Q84FS5
- modified residue (118)
- modified residue (120)
Domains in SCOPe 2.08: d2dppa_ - Chain 'B':
Compound: Nitrile hydratase beta subunit
Species: Bacillus sp. RAPc8 [TaxId:218609]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2dppb_ - Heterogens: CO, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2dppA (A:)
mtidqkntnidprfphhhprpqsfwearakaleslliekghlssdaiervikhyehelgp
mngakvvakawtdpafkqrlledsetvlrelgyyglqgehirvventdtvhnvvvctlcs
cypwpllglppswykepayrarvvkeprqvlkefgldlpdsveirvwdssseirfmvlpq
rpegtegmteeelaklvtrdsmigvakieppkvtvg
Sequence, based on observed residues (ATOM records): (download)
>2dppA (A:)
idprfphhhprpqsfwearakaleslliekghlssdaiervikhyehelgpmngakvvak
awtdpafkqrlledsetvlrelgyyglqgehirvventdtvhnvvvctlcscypwpllgl
ppswykepayrarvvkeprqvlkefgldlpdsveirvwdssseirfmvlpqrpegtegmt
eeelaklvtrdsmigvakiepp
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2dppB (B:)
mngihdvggmdgfgkvmyvkeeediyfthdwerlafglvagcmaqglgmkafdefrigie
lmrpvdyltssyyghwiatvaynlvdtgvldekeldertevflkkpdtkiprredpalvk
lvekalydglsplreisasprfkvgeriktknihptghtrfpryardkygvidevygahv
fpddaahrkgenpqylyrvrfeaeelwgykqkdsvyidlwesymepvsh
Sequence, based on observed residues (ATOM records): (download)
>2dppB (B:)
mngihdvggmdgfgkvmyvkeeediyfthdwerlafglvagcmaqglgmkafdefrigie
lmrpvdyltssyyghwiatvaynlvdtgvldekeldertevflkkpdtkiprredpalvk
lvekalydglsplreisasprfkvgeriktknihptghtrfpryardkygvidevygahv
fpddaahrkgenpqylyrvrfeaeelwgykqkdsvyidlwesymepv