PDB entry 2dkb

View 2dkb on RCSB PDB site
Description: dialkylglycine decarboxylase structure: bifunctional active site and alkali metal binding sites
Class: lyase(decarboxylase)
Keywords: lyase(decarboxylase)
Deposited on 1994-07-12, released 1994-10-15
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-11-29, with a file datestamp of 2017-11-24.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 2,2-dialkylglycine decarboxylase (pyruvate)
    Species: Burkholderia cepacia [TaxId:292]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P16932 (Start-432)
      • conflict (14)
      • conflict (80)
    Domains in SCOPe 2.08: d2dkba_
  • Heterogens: NA, PLP, MES, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2dkbA (A:)
mslnddatfwrnarhhlvryggtfepmiierakgsfvydadgraildftsgqmsavlghc
hpeivsvigeyagkldhlfsemlsrpvvdlatrlanitppgldralllstgaesneaair
maklvtgkyeivgfaqswhgmtgaaasatysagrkgvgpaavgsfaipapftyrprfern
gaydylaeldyafdlidrqssgnlaafiaepilssggiielpdgymaalkrkceargmll
ildeaqtgvgrtgtmfacqrdgvtpdiltlsktlgaglplaaivtsaaieerahelgylf
ytthvsdplpaavglrvldvvqrdglvaranvmgdrlrrglldlmerfdcigdvrgrgll
lgveivkdrrtkepadglgakitrecmnlglsmnivqlpgmggvfriappltvsedeidl
glsllgqaieral

    Sequence, based on observed residues (ATOM records): (download) 
    >2dkbA (A:)
lnddatfwrnarhhlvryggtfepmiierakgsfvydadgraildftsgqmsavlghchp
eivsvigeyagkldhlfsemlsrpvvdlatrlanitppgldralllstgaesneaairma
klvtgkyeivgfaqswhgmtgaaasatysagrkgvgpaavgsfaipapftyrprfernga
ydylaeldyafdlidrqssgnlaafiaepilssggiielpdgymaalkrkceargmllil
deaqtgvgrtgtmfacqrdgvtpdiltlsktlgaglplaaivtsaaieerahelgylfyt
thvsdplpaavglrvldvvqrdglvaranvmgdrlrrglldlmerfdcigdvrgrglllg
veivkdrrtkepadglgakitrecmnlglsmnivqlpgmggvfriappltvsedeidlgl
sllgqaieral