PDB entry 2dg1

View 2dg1 on RCSB PDB site
Description: Crystal structure of Drp35, a 35kDa drug responsive protein from Staphylococcus aureus, complexed with Ca2+
Class: hydrolase
Keywords: beta propeller, hydrolase
Deposited on 2006-03-07, released 2006-12-12
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.72 Å
R-factor: 0.169
AEROSPACI score: 0.56 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DrP35
    Species: Staphylococcus aureus [TaxId:1280]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9S0S3 (Start-324)
      • expression tag (325)
    Domains in SCOPe 2.08: d2dg1a2, d2dg1a3
  • Chain 'B':
    Compound: DrP35
    Species: Staphylococcus aureus [TaxId:1280]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9S0S3 (Start-324)
      • expression tag (325-326)
    Domains in SCOPe 2.08: d2dg1b2, d2dg1b3
  • Chain 'C':
    Compound: DrP35
    Species: Staphylococcus aureus [TaxId:1280]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2dg1c_
  • Chain 'D':
    Compound: DrP35
    Species: Staphylococcus aureus [TaxId:1280]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9S0S3 (Start-324)
      • expression tag (325)
    Domains in SCOPe 2.08: d2dg1d2, d2dg1d3
  • Chain 'E':
    Compound: DrP35
    Species: Staphylococcus aureus [TaxId:1280]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9S0S3 (Start-324)
      • expression tag (325)
    Domains in SCOPe 2.08: d2dg1e2, d2dg1e3
  • Chain 'F':
    Compound: DrP35
    Species: Staphylococcus aureus [TaxId:1280]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9S0S3 (Start-324)
      • expression tag (325)
    Domains in SCOPe 2.08: d2dg1f2, d2dg1f3
  • Heterogens: CA, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >2dg1A (A:)
    mamsqqdlptlfysgksnsavpiiseselqtitaepwleiskkglqleglnfdrqgqlfl
    ldvfegnifkinpetkeikrpfvshkanpaaikihkdgrlfvcylgdfkstggifaaten
    gdnlqdiiedlstayciddmvfdskggfyftdfrgystnplggvyyvspdfrtvtpiiqn
    isvangialstdekvlwvtettanrlhrialeddgvtiqpfgatipyyftghegpdscci
    dsddnlyvamygqgrvlvfnkrgypigqilipgrdeghmlrsthpqfipgtnqliicsnd
    iemgggsmlytvngfakghqsfqfqlehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >2dg1A (A:)
    qdlptlfysgksnsavpiiseselqtitaepwleiskkglqleglnfdrqgqlflldvfe
    gnifkinpetkeikrpfvshkanpaaikihkdgrlfvcylgdfkstggifaatengdnlq
    diiedlstayciddmvfdskggfyftdfrgystnplggvyyvspdfrtvtpiiqnisvan
    gialstdekvlwvtettanrlhrialeddgvtiqpfgatipyyftghegpdsccidsddn
    lyvamygqgrvlvfnkrgypigqilipgrdeghmlrsthpqfipgtnqliicsndiemgg
    gsmlytvngfakghqsfqfql
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >2dg1B (B:)
    mamsqqdlptlfysgksnsavpiiseselqtitaepwleiskkglqleglnfdrqgqlfl
    ldvfegnifkinpetkeikrpfvshkanpaaikihkdgrlfvcylgdfkstggifaaten
    gdnlqdiiedlstayciddmvfdskggfyftdfrgystnplggvyyvspdfrtvtpiiqn
    isvangialstdekvlwvtettanrlhrialeddgvtiqpfgatipyyftghegpdscci
    dsddnlyvamygqgrvlvfnkrgypigqilipgrdeghmlrsthpqfipgtnqliicsnd
    iemgggsmlytvngfakghqsfqfqlehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >2dg1B (B:)
    qdlptlfysgksnsavpiiseselqtitaepwleiskkglqleglnfdrqgqlflldvfe
    gnifkinpetkeikrpfvshkanpaaikihkdgrlfvcylgdfkstggifaatengdnlq
    diiedlstayciddmvfdskggfyftdfrgystnplggvyyvspdfrtvtpiiqnisvan
    gialstdekvlwvtettanrlhrialeddgvtiqpfgatipyyftghegpdsccidsddn
    lyvamygqgrvlvfnkrgypigqilipgrdeghmlrsthpqfipgtnqliicsndiemgg
    gsmlytvngfakghqsfqfqle
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >2dg1C (C:)
    mamsqqdlptlfysgksnsavpiiseselqtitaepwleiskkglqleglnfdrqgqlfl
    ldvfegnifkinpetkeikrpfvshkanpaaikihkdgrlfvcylgdfkstggifaaten
    gdnlqdiiedlstayciddmvfdskggfyftdfrgystnplggvyyvspdfrtvtpiiqn
    isvangialstdekvlwvtettanrlhrialeddgvtiqpfgatipyyftghegpdscci
    dsddnlyvamygqgrvlvfnkrgypigqilipgrdeghmlrsthpqfipgtnqliicsnd
    iemgggsmlytvngfakghqsfqfqlehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >2dg1C (C:)
    qdlptlfysgksnsavpiiseselqtitaepwleiskkglqleglnfdrqgqlflldvfe
    gnifkinpetkeikrpfvshkanpaaikihkdgrlfvcylgdfkstggifaatengdnlq
    diiedlstayciddmvfdskggfyftdfrgystnplggvyyvspdfrtvtpiiqnisvan
    gialstdekvlwvtettanrlhrialeddgvtiqpfgatipyyftghegpdsccidsddn
    lyvamygqgrvlvfnkrgypigqilipgrdeghmlrsthpqfipgtnqliicsndiemgg
    gsmlytvngfakghqsfqfq
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >2dg1D (D:)
    mamsqqdlptlfysgksnsavpiiseselqtitaepwleiskkglqleglnfdrqgqlfl
    ldvfegnifkinpetkeikrpfvshkanpaaikihkdgrlfvcylgdfkstggifaaten
    gdnlqdiiedlstayciddmvfdskggfyftdfrgystnplggvyyvspdfrtvtpiiqn
    isvangialstdekvlwvtettanrlhrialeddgvtiqpfgatipyyftghegpdscci
    dsddnlyvamygqgrvlvfnkrgypigqilipgrdeghmlrsthpqfipgtnqliicsnd
    iemgggsmlytvngfakghqsfqfqlehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >2dg1D (D:)
    qqdlptlfysgksnsavpiiseselqtitaepwleiskkglqleglnfdrqgqlflldvf
    egnifkinpetkeikrpfvshkanpaaikihkdgrlfvcylgdfkstggifaatengdnl
    qdiiedlstayciddmvfdskggfyftdfrgystnplggvyyvspdfrtvtpiiqnisva
    ngialstdekvlwvtettanrlhrialeddgvtiqpfgatipyyftghegpdsccidsdd
    nlyvamygqgrvlvfnkrgypigqilipgrdeghmlrsthpqfipgtnqliicsndiemg
    ggsmlytvngfakghqsfqfql
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >2dg1E (E:)
    mamsqqdlptlfysgksnsavpiiseselqtitaepwleiskkglqleglnfdrqgqlfl
    ldvfegnifkinpetkeikrpfvshkanpaaikihkdgrlfvcylgdfkstggifaaten
    gdnlqdiiedlstayciddmvfdskggfyftdfrgystnplggvyyvspdfrtvtpiiqn
    isvangialstdekvlwvtettanrlhrialeddgvtiqpfgatipyyftghegpdscci
    dsddnlyvamygqgrvlvfnkrgypigqilipgrdeghmlrsthpqfipgtnqliicsnd
    iemgggsmlytvngfakghqsfqfqlehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >2dg1E (E:)
    qdlptlfysgksnsavpiiseselqtitaepwleiskkglqleglnfdrqgqlflldvfe
    gnifkinpetkeikrpfvshkanpaaikihkdgrlfvcylgdfkstggifaatengdnlq
    diiedlstayciddmvfdskggfyftdfrgystnplggvyyvspdfrtvtpiiqnisvan
    gialstdekvlwvtettanrlhrialeddgvtiqpfgatipyyftghegpdsccidsddn
    lyvamygqgrvlvfnkrgypigqilipgrdeghmlrsthpqfipgtnqliicsndiemgg
    gsmlytvngfakghqsfqfql
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >2dg1F (F:)
    mamsqqdlptlfysgksnsavpiiseselqtitaepwleiskkglqleglnfdrqgqlfl
    ldvfegnifkinpetkeikrpfvshkanpaaikihkdgrlfvcylgdfkstggifaaten
    gdnlqdiiedlstayciddmvfdskggfyftdfrgystnplggvyyvspdfrtvtpiiqn
    isvangialstdekvlwvtettanrlhrialeddgvtiqpfgatipyyftghegpdscci
    dsddnlyvamygqgrvlvfnkrgypigqilipgrdeghmlrsthpqfipgtnqliicsnd
    iemgggsmlytvngfakghqsfqfqlehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >2dg1F (F:)
    qdlptlfysgksnsavpiiseselqtitaepwleiskkglqleglnfdrqgqlflldvfe
    gnifkinpetkeikrpfvshkanpaaikihkdgrlfvcylgdfkstggifaatengdnlq
    diiedlstayciddmvfdskggfyftdfrgystnplggvyyvspdfrtvtpiiqnisvan
    gialstdekvlwvtettanrlhrialeddgvtiqpfgatipyyftghegpdsccidsddn
    lyvamygqgrvlvfnkrgypigqilipgrdeghmlrsthpqfipgtnqliicsndiemgg
    gsmlytvngfakghqsfqfql