PDB entry 2dft

View 2dft on RCSB PDB site
Description: Structure of shikimate kinase from Mycobacterium tuberculosis complexed with ADP and Mg at 2.8 angstrons of resolution
Class: transferase
Keywords: alpha/beta, shikimate pathway, TRANSFERASE
Deposited on 2006-03-03, released 2007-01-16
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.183
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Shikimate kinase
    Species: Mycobacterium tuberculosis [TaxId:1773]
    Gene: AroK
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2dfta_
  • Chain 'B':
    Compound: Shikimate kinase
    Species: Mycobacterium tuberculosis [TaxId:1773]
    Gene: AroK
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2dftb_
  • Chain 'C':
    Compound: Shikimate kinase
    Species: Mycobacterium tuberculosis [TaxId:1773]
    Gene: AroK
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2dftc_
  • Chain 'D':
    Compound: Shikimate kinase
    Species: Mycobacterium tuberculosis [TaxId:1773]
    Gene: AroK
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2dftd_
  • Heterogens: MG, CL, ADP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2dftA (A:)
mapkavlvglpgsgkstigrrlakalgvglldtdvaieqrtgrsiadifatdgeqefrri
eedvvraaladhdgvlslgggavtspgvraalaghtvvyleisaaegvrrtggntvrpll
agpdraekyralmakraplyrrvatmrvdtnrrnpgavvrhilsrlqvpspseaat

    Sequence, based on observed residues (ATOM records): (download) 
    >2dftA (A:)
apkavlvglpgsgkstigrrlakalgvglldtdvaieqrtgrsiadifatdgeqefrrie
edvvraaladhdgvlslgggavtspgvraalaghtvvyleisaaegvrrtggndraekyr
almakraplyrrvatmrvdtnrrnpgavvrhilsrl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2dftB (B:)
mapkavlvglpgsgkstigrrlakalgvglldtdvaieqrtgrsiadifatdgeqefrri
eedvvraaladhdgvlslgggavtspgvraalaghtvvyleisaaegvrrtggntvrpll
agpdraekyralmakraplyrrvatmrvdtnrrnpgavvrhilsrlqvpspseaat

    Sequence, based on observed residues (ATOM records): (download) 
    >2dftB (B:)
apkavlvglpgsgkstigrrlakalgvglldtdvaieqrtgrsiadifatdgeqefrrie
edvvraaladhdgvlslgggavtspgvraalaghtvvyleisaaegvrrtggntvrplla
gpdraekyralmakraplyrrvatmrvdtnrrnpgavvrhilsrl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2dftC (C:)
mapkavlvglpgsgkstigrrlakalgvglldtdvaieqrtgrsiadifatdgeqefrri
eedvvraaladhdgvlslgggavtspgvraalaghtvvyleisaaegvrrtggntvrpll
agpdraekyralmakraplyrrvatmrvdtnrrnpgavvrhilsrlqvpspseaat

    Sequence, based on observed residues (ATOM records): (download) 
    >2dftC (C:)
apkavlvglpgsgkstigrrlakalgvglldtdvaieqrtgrsiadifatdgeqefrrie
edvvraaladhdgvlslgggavtspgvraalaghtvvyleisaaegvrrtggdraekyra
lmakraplyrrvatmrvdtnrrnpgavvrhilsrl

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2dftD (D:)
mapkavlvglpgsgkstigrrlakalgvglldtdvaieqrtgrsiadifatdgeqefrri
eedvvraaladhdgvlslgggavtspgvraalaghtvvyleisaaegvrrtggntvrpll
agpdraekyralmakraplyrrvatmrvdtnrrnpgavvrhilsrlqvpspseaat

    Sequence, based on observed residues (ATOM records): (download) 
    >2dftD (D:)
apkavlvglpgsgkstigrrlakalgvglldtdvaieqrtgrsiadifatdgeqefrrie
edvvraaladhdgvlslgggavtspgvraalaghtvvyleisaaegvrrtggntvrplla
gpdraekyralmakraplyrrvatmrvdtnrrnpgavvrhilsrl