PDB entry 2dek
View 2dek on RCSB PDB site
Description: Crystal structure of project ID PH0725 from Pyrococcus horikoshii OT3 at 1.65 A resolution
Class: Transferase
Keywords: ALPHA/BETA FOLD, ANTIPARALLEL BETA-SHEET, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, Transferase
Deposited on
2006-02-10, released
2006-07-18
The last revision prior to the SCOPe 2.08 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 1.65 Å
R-factor: 0.21
AEROSPACI score: 0.55
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Probable diphthine synthase
Species: Pyrococcus horikoshii [TaxId:70601]
Gene: dphB
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2deka_ - Chain 'B':
Compound: Probable diphthine synthase
Species: Pyrococcus horikoshii [TaxId:70601]
Gene: dphB
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2dekb_ - Heterogens: NA, SAH, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>2dekA (A:)
mvlyfiglglyderditvkgleiakkcdyvfaefytslmagttlgriqkligkeirvlsr
edvelnfenivlplakendvafltpgdplvatthaelrirakragvesyvihapsiysav
gitglhiykfgksatvaypegnwfptsyydvikenaerglhtllfldikaekrmymtane
amelllkvedmkkggvftddtlvvvlaragslnptiragyvkdliredfgdpphilivpg
klhiveaeylveiagapreilrvnv
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>2dekB (B:)
mvlyfiglglyderditvkgleiakkcdyvfaefytslmagttlgriqkligkeirvlsr
edvelnfenivlplakendvafltpgdplvatthaelrirakragvesyvihapsiysav
gitglhiykfgksatvaypegnwfptsyydvikenaerglhtllfldikaekrmymtane
amelllkvedmkkggvftddtlvvvlaragslnptiragyvkdliredfgdpphilivpg
klhiveaeylveiagapreilrvnv