PDB entry 2de5

View 2de5 on RCSB PDB site
Description: Crystal structure of the electron transfer complex between oxygenase and ferredoxin in carbazole 1,9a-dioxygenase
Class: oxidoreductase
Keywords: Electron transfer complex, Rieske non-heme iron oxygenase system, Terminal oxygenase, Rieske-type ferredoxin, carbazole 1,9a-dioxygenase, OXIDOREDUCTASE
Deposited on 2006-02-08, released 2006-12-05
The last revision prior to the SCOPe 2.05 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.199
AEROSPACI score: 0.46 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: terminal oxygenase component of carbazole
    Species: Janthinobacterium [TaxId:29580]
    Database cross-references and differences (RAF-indexed):
    • GB BAC56742 (0-383)
      • expression tag (384-388)
    Domains in SCOPe 2.05: d2de5a1, d2de5a2
  • Chain 'B':
    Compound: terminal oxygenase component of carbazole
    Species: Janthinobacterium [TaxId:29580]
    Database cross-references and differences (RAF-indexed):
    • GB BAC56742 (0-383)
      • expression tag (384-388)
    Domains in SCOPe 2.05: d2de5b1, d2de5b2
  • Chain 'C':
    Compound: terminal oxygenase component of carbazole
    Species: Janthinobacterium [TaxId:29580]
    Database cross-references and differences (RAF-indexed):
    • GB BAC56742 (0-383)
      • expression tag (384-388)
    Domains in SCOPe 2.05: d2de5c1, d2de5c2
  • Chain 'D':
    Compound: ferredoxin component of carbazole
    Species: Pseudomonas resinovorans [TaxId:53412]
    Database cross-references and differences (RAF-indexed):
    • GB NP_758571 (Start-106)
      • expression tag (107)
  • Chain 'E':
    Compound: ferredoxin component of carbazole
    Species: Pseudomonas resinovorans [TaxId:53412]
    Database cross-references and differences (RAF-indexed):
    • GB NP_758571 (Start-106)
      • expression tag (107)
  • Chain 'F':
    Compound: ferredoxin component of carbazole
    Species: Pseudomonas resinovorans [TaxId:53412]
    Database cross-references and differences (RAF-indexed):
    • GB NP_758571 (Start-106)
  • Heterogens: FE2, FES, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2de5A (A:)
manvdeailkrvkgwapyvdaklgfrnhwypvmfskeinegepktlkllgenllvnridg
klyclkdrclhrgvqlsvkvecktkstitcwyhawtyrwedgvlcdiltnptsaqigrqk
lktypvqeakgcvfiylgdgdppplardtppnfldddmeilgknqiiksnwrlavengfd
pshiyihkdsilvkdndlalplgfapggdrkqqtrvvdddvvgrkgvydligehgvpvfe
gtiggevvregaygekivandisiwlpgvlkvnpfpnpdmmqfewyvpidenthyyfqtl
gkpcandeerkkyeqefeskwkpmalegfnnddiwareamvdfyaddkgwvneilfesde
aivawrklasehnqgiqtqahvsglehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2de5A (A:)
manvdeailkrvkgwapyvdaklgfrnhwypvmfskeinegepktlkllgenllvnridg
klyclkdrclhrgvqlsvkvecktkstitcwyhawtyrwedgvlcdiltnptsaqigrqk
lktypvqeakgcvfiylgdgdppplardtppnfldddmeilgknqiiksnwrlavengfd
pshiyihkdsilvkdndlalplgfapggdrkqqtrvvdddvvgrkgvydligehgvpvfe
gtiggevvregaygekivandisiwlpgvlkvnpfpnpdmmqfewyvpidenthyyfqtl
gkpcandeerkkyeqefeskwkpmalegfnnddiwareamvdfyaddkgwvneilfesde
aivawrklasehnqgiqtqahvsglehhh

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2de5B (B:)
manvdeailkrvkgwapyvdaklgfrnhwypvmfskeinegepktlkllgenllvnridg
klyclkdrclhrgvqlsvkvecktkstitcwyhawtyrwedgvlcdiltnptsaqigrqk
lktypvqeakgcvfiylgdgdppplardtppnfldddmeilgknqiiksnwrlavengfd
pshiyihkdsilvkdndlalplgfapggdrkqqtrvvdddvvgrkgvydligehgvpvfe
gtiggevvregaygekivandisiwlpgvlkvnpfpnpdmmqfewyvpidenthyyfqtl
gkpcandeerkkyeqefeskwkpmalegfnnddiwareamvdfyaddkgwvneilfesde
aivawrklasehnqgiqtqahvsglehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2de5B (B:)
manvdeailkrvkgwapyvdaklgfrnhwypvmfskeinegepktlkllgenllvnridg
klyclkdrclhrgvqlsvkvecktkstitcwyhawtyrwedgvlcdiltnptsaqigrqk
lktypvqeakgcvfiylgdgdppplardtppnfldddmeilgknqiiksnwrlavengfd
pshiyihkdsilvkdndlalplgfapggdrkqqtrvvdddvvgrkgvydligehgvpvfe
gtiggevvregaygekivandisiwlpgvlkvnpfpnpdmmqfewyvpidenthyyfqtl
gkpcandeerkkyeqefeskwkpmalegfnnddiwareamvdfyaddkgwvneilfesde
aivawrklasehnqgiqtqahvsglehhh

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2de5C (C:)
manvdeailkrvkgwapyvdaklgfrnhwypvmfskeinegepktlkllgenllvnridg
klyclkdrclhrgvqlsvkvecktkstitcwyhawtyrwedgvlcdiltnptsaqigrqk
lktypvqeakgcvfiylgdgdppplardtppnfldddmeilgknqiiksnwrlavengfd
pshiyihkdsilvkdndlalplgfapggdrkqqtrvvdddvvgrkgvydligehgvpvfe
gtiggevvregaygekivandisiwlpgvlkvnpfpnpdmmqfewyvpidenthyyfqtl
gkpcandeerkkyeqefeskwkpmalegfnnddiwareamvdfyaddkgwvneilfesde
aivawrklasehnqgiqtqahvsglehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2de5C (C:)
manvdeailkrvkgwapyvdaklgfrnhwypvmfskeinegepktlkllgenllvnridg
klyclkdrclhrgvqlsvkvecktkstitcwyhawtyrwedgvlcdiltnptsaqigrqk
lktypvqeakgcvfiylgdgdppplardtppnfldddmeilgknqiiksnwrlavengfd
pshiyihkdsilvkdndlalplgfapggdrkqqtrvvdddvvgrkgvydligehgvpvfe
gtiggevvregaygekivandisiwlpgvlkvnpfpnpdmmqfewyvpidenthyyfqtl
gkpcandeerkkyeqefeskwkpmalegfnnddiwareamvdfyaddkgwvneilfesde
aivawrklasehnqgiqtqahvsglehhh

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.