PDB entry 2ddz
View 2ddz on RCSB PDB site
Description: Protein of Unknown Function from Pyrococcus horikoshi
Class: structural genomics, unknown function
Keywords: Hexamer, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, UNKNOWN FUNCTION
Deposited on
2006-02-07, released
2007-02-13
The last revision prior to the SCOPe 2.05 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 2.24 Å
R-factor: 0.213
AEROSPACI score: 0.38
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: 190aa long hypothetical protein
Species: Pyrococcus horikoshii [TaxId:70601]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d2ddza1 - Chain 'B':
Compound: 190aa long hypothetical protein
Species: Pyrococcus horikoshii [TaxId:70601]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d2ddzb_ - Chain 'C':
Compound: 190aa long hypothetical protein
Species: Pyrococcus horikoshii [TaxId:70601]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d2ddzc_ - Chain 'D':
Compound: 190aa long hypothetical protein
Species: Pyrococcus horikoshii [TaxId:70601]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d2ddzd_ - Chain 'E':
Compound: 190aa long hypothetical protein
Species: Pyrococcus horikoshii [TaxId:70601]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d2ddze_ - Chain 'F':
Compound: 190aa long hypothetical protein
Species: Pyrococcus horikoshii [TaxId:70601]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d2ddzf_ - Heterogens: GAI, GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2ddzA (A:)
mnsmelliikerridydgsairshwayrnfgilgdslvvfrgkcnvkveemvdiedlrlr
keikgddmvhyilelfwhpdillasslqklliarlvellwnygieasrrgddiyvngrkl
sisiatvspvsikihiglnvktvgvppgvdaigleelgidptefmersakalveeiekvr
kdslkvrwvt
Sequence, based on observed residues (ATOM records): (download)
>2ddzA (A:)
smelliikerridydgsairshwayrnfgilgdslvvfrgkcnvkveemvdiedlrlrke
ikgddmvhyilelfwhpdillasslqklliarlvellwnygieasrrgddiyvngrklsi
siatvspvsikihiglnvktvgvppgvdaigleelgidptefmersakalveeiekvrkd
slkvrwvt
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2ddzB (B:)
mnsmelliikerridydgsairshwayrnfgilgdslvvfrgkcnvkveemvdiedlrlr
keikgddmvhyilelfwhpdillasslqklliarlvellwnygieasrrgddiyvngrkl
sisiatvspvsikihiglnvktvgvppgvdaigleelgidptefmersakalveeiekvr
kdslkvrwvt
Sequence, based on observed residues (ATOM records): (download)
>2ddzB (B:)
smelliikerridydgsairshwayrnfgilgdslvvfrgkcnvkveemvdiedlrlrke
ikgddmvhyilelfwhpdillasslqklliarlvellwnygieasrrgddiyvngrklsi
siatvspvsikihiglnvktvgvppgvdaigleelgidptefmersakalveeiekvrkd
slkvrwvt
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2ddzC (C:)
mnsmelliikerridydgsairshwayrnfgilgdslvvfrgkcnvkveemvdiedlrlr
keikgddmvhyilelfwhpdillasslqklliarlvellwnygieasrrgddiyvngrkl
sisiatvspvsikihiglnvktvgvppgvdaigleelgidptefmersakalveeiekvr
kdslkvrwvt
Sequence, based on observed residues (ATOM records): (download)
>2ddzC (C:)
smelliikerridydgsairshwayrnfgilgdslvvfrgkcnvkveemvdiedlrlrke
ikgddmvhyilelfwhpdillasslqklliarlvellwnygieasrrgddiyvngrklsi
siatvspvsikihiglnvktvgvppgvdaigleelgidptefmersakalveeiekvrkd
slkvrwvt
- Chain 'D':
Sequence, based on SEQRES records: (download)
>2ddzD (D:)
mnsmelliikerridydgsairshwayrnfgilgdslvvfrgkcnvkveemvdiedlrlr
keikgddmvhyilelfwhpdillasslqklliarlvellwnygieasrrgddiyvngrkl
sisiatvspvsikihiglnvktvgvppgvdaigleelgidptefmersakalveeiekvr
kdslkvrwvt
Sequence, based on observed residues (ATOM records): (download)
>2ddzD (D:)
smelliikerridydgsairshwayrnfgilgdslvvfrgkcnvkveemvdiedlrlrke
ikgddmvhyilelfwhpdillasslqklliarlvellwnygieasrrgddiyvngrklsi
siatvspvsikihiglnvktvgvppgvdaigleelgidptefmersakalveeiekvrkd
slkvrwvt
- Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
>2ddzE (E:)
mnsmelliikerridydgsairshwayrnfgilgdslvvfrgkcnvkveemvdiedlrlr
keikgddmvhyilelfwhpdillasslqklliarlvellwnygieasrrgddiyvngrkl
sisiatvspvsikihiglnvktvgvppgvdaigleelgidptefmersakalveeiekvr
kdslkvrwvt
- Chain 'F':
Sequence, based on SEQRES records: (download)
>2ddzF (F:)
mnsmelliikerridydgsairshwayrnfgilgdslvvfrgkcnvkveemvdiedlrlr
keikgddmvhyilelfwhpdillasslqklliarlvellwnygieasrrgddiyvngrkl
sisiatvspvsikihiglnvktvgvppgvdaigleelgidptefmersakalveeiekvr
kdslkvrwvt
Sequence, based on observed residues (ATOM records): (download)
>2ddzF (F:)
smelliikerridydgsairshwayrnfgilgdslvvfrgkcnvkveemvdiedlrlrke
ikgddmvhyilelfwhpdillasslqklliarlvellwnygieasrrgddiyvngrklsi
siatvspvsikihiglnvktvgvppgvdaigleelgidptefmersakalveeiekvrkd
slkvrwvt