SCOPe 2.08: Structural Classification of Proteins

PDB entry 2dd9

View 2dd9 on RCSB PDB site
Description: A mutant of GFP-like protein from Chiridius poppei
Class: luminescent protein
Keywords: gfp-like protein, fluorescent protein, luminescent protein
Deposited on 2006-01-24, released 2007-01-23
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-06-30, with a file datestamp of 2009-06-26.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.185
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: Green fluorescent protein
Species: Chiridius poppei [TaxId:286301]
Database cross-references and differences (RAF-indexed):
- Uniprot Q2MHN7 (0-End)
  - engineered (50)
  - chromophore (54)
Domains in SCOPe 2.08: d2dd9a_
Chain 'B':
Compound: Green fluorescent protein
Species: Chiridius poppei [TaxId:286301]
Database cross-references and differences (RAF-indexed):
- Uniprot Q2MHN7 (0-End)
  - engineered (50)
  - chromophore (54)
Domains in SCOPe 2.08: d2dd9b_
Chain 'C':
Compound: Green fluorescent protein
Species: Chiridius poppei [TaxId:286301]
Database cross-references and differences (RAF-indexed):
- Uniprot Q2MHN7 (0-End)
  - engineered (50)
  - chromophore (54)
Domains in SCOPe 2.08: d2dd9c_
Chain 'D':
Compound: Green fluorescent protein
Species: Chiridius poppei [TaxId:286301]
Database cross-references and differences (RAF-indexed):
- Uniprot Q2MHN7 (0-End)
  - engineered (50)
  - chromophore (54)
Domains in SCOPe 2.08: d2dd9d_
Heterogens: CXS, CL, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>2dd9A (A:)
ttfkiesrihgnlngekfelvgggvgeegrleiemktkdkplafspfllstcmgygfyhf
asfpkgtkniylhaatnggytntrkeiyedggilevnfrytyefnkiigdvecighgfps
qspifkdtivkscptvdlmlpmsgniiassyarafqlkdgsfytaevknnidfknpihes
fsksgpmfthrrveethtkenlamveyqqvfnsaprdm

Sequence, based on observed residues (ATOM records): (download)

>2dd9A (A:)
ttfkiesrihgnlngekfelvgggvgeegrleiemktkdkplafspfllstcmgygfyhf
asfpkgtkniylhaatnggytntrkeiyedggilevnfrytyefnkiigdvecighgfps
qspifkdtivkscptvdlmlpmsgniiassyarafqlkdgsfytaevknnidfknpihes
fsksgpmfthrrveethtkenlamveyqqvfnsaprd

Chain 'B':
Sequence, based on SEQRES records: (download)

>2dd9B (B:)
ttfkiesrihgnlngekfelvgggvgeegrleiemktkdkplafspfllstcmgygfyhf
asfpkgtkniylhaatnggytntrkeiyedggilevnfrytyefnkiigdvecighgfps
qspifkdtivkscptvdlmlpmsgniiassyarafqlkdgsfytaevknnidfknpihes
fsksgpmfthrrveethtkenlamveyqqvfnsaprdm

Sequence, based on observed residues (ATOM records): (download)

>2dd9B (B:)
ttfkiesrihgnlngekfelvgggvgeegrleiemktkdkplafspfllstcmgygfyhf
asfpkgtkniylhaatnggytntrkeiyedggilevnfrytyefnkiigdvecighgfps
qspifkdtivkscptvdlmlpmsgniiassyarafqlkdgsfytaevknnidfknpihes
fsksgpmfthrrveethtkenlamveyqqvfnsaprd

Chain 'C':
Sequence, based on SEQRES records: (download)

>2dd9C (C:)
ttfkiesrihgnlngekfelvgggvgeegrleiemktkdkplafspfllstcmgygfyhf
asfpkgtkniylhaatnggytntrkeiyedggilevnfrytyefnkiigdvecighgfps
qspifkdtivkscptvdlmlpmsgniiassyarafqlkdgsfytaevknnidfknpihes
fsksgpmfthrrveethtkenlamveyqqvfnsaprdm

Sequence, based on observed residues (ATOM records): (download)

>2dd9C (C:)
ttfkiesrihgnlngekfelvgggvgeegrleiemktkdkplafspfllstcmgygfyhf
asfpkgtkniylhaatnggytntrkeiyedggilevnfrytyefnkiigdvecighgfps
qspifkdtivkscptvdlmlpmsgniiassyarafqlkdgsfytaevknnidfknpihes
fsksgpmfthrrveethtkenlamveyqqvfnsapr

Chain 'D':
Sequence, based on SEQRES records: (download)

>2dd9D (D:)
ttfkiesrihgnlngekfelvgggvgeegrleiemktkdkplafspfllstcmgygfyhf
asfpkgtkniylhaatnggytntrkeiyedggilevnfrytyefnkiigdvecighgfps
qspifkdtivkscptvdlmlpmsgniiassyarafqlkdgsfytaevknnidfknpihes
fsksgpmfthrrveethtkenlamveyqqvfnsaprdm

Sequence, based on observed residues (ATOM records): (download)

>2dd9D (D:)
ttfkiesrihgnlngekfelvgggvgeegrleiemktkdkplafspfllstcmgygfyhf
asfpkgtkniylhaatnggytntrkeiyedggilevnfrytyefnkiigdvecighgfps
qspifkdtivkscptvdlmlpmsgniiassyarafqlkdgsfytaevknnidfknpihes
fsksgpmfthrrveethtkenlamveyqqvfnsaprd