PDB entry 2d7s

View 2d7s on RCSB PDB site
Description: Foot and Mouth Disease Virus RNA-dependent RNA polymerase in complex with VPg protein
Class: transferase
Keywords: Foot and mouth disease virus, RNA-dependent RNA polymerase, 3D polymerase, VPg, protein-primer, TRANSFERASE
Deposited on 2005-11-29, released 2006-03-28
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 3 Å
R-factor: 0.277
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: RNA-dependent RNA polymerase
    Species: Foot-and-mouth disease virus [TaxId:244367]
    Database cross-references and differences (RAF-indexed):
    • GB CAB60266 (0-469)
      • cloning artifact (470-473)
    Domains in SCOPe 2.08: d2d7sa1, d2d7sa2
  • Chain 'B':
    Compound: VPg1 protein
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • GB CAB60266 (0-End)

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2d7sA (A:)
glivdtrdveervhvmrktklaptvahgvfnpefgpaalsnkdprlnegvvldevifskh
kgdtkmsaedkalfrrcaadyasrlhsvlgtanaplsiyeaikgvdgldamepdtapglp
walqgkrrgalidfengtvgpeveaalklmekreykfacqtflkdeirpmekvragktri
vdvlpvehilytrmmigrfcaqmhsnngpqigsavgcnpdvdwqrfgthfaqyrnvwdvd
ysafdanhcsdamnimfeevfrtefgfhpnaewilktlvntehayenkritveggmpsgc
satsiintilnniyvlyalrrhyegveldtytmisygddivvasdydldfealkphfksl
gqtitpadksdkgfvlghsitdvtflkrhfhmdygtgfykpvmasktleailsfarrgti
qeklisvaglavhsgpdeyrrlfepfqglfeipsyrslylrwvnavcgdaaale

  • Chain 'B':
    No sequence available.