PDB entry 2d1y

View 2d1y on RCSB PDB site
Description: Crystal structure of TT0321 from Thermus thermophilus HB8
Class: oxidoreductase
Keywords: strucrtural genomics, Thermus thermophilus HB8, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, OXIDOREDUCTASE
Deposited on 2005-09-02, released 2006-03-02
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.65 Å
R-factor: 0.175
AEROSPACI score: 0.58 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: hypothetical protein TT0321
    Species: Thermus thermophilus [TaxId:274]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2d1ya1
  • Chain 'B':
    Compound: hypothetical protein TT0321
    Species: Thermus thermophilus [TaxId:274]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2d1yb_
  • Chain 'C':
    Compound: hypothetical protein TT0321
    Species: Thermus thermophilus [TaxId:274]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2d1yc_
  • Chain 'D':
    Compound: hypothetical protein TT0321
    Species: Thermus thermophilus [TaxId:274]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2d1yd_
  • Heterogens: NAD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >2d1yA (A:)
    mglfagkgvlvtggargigraiaqafaregalvalcdlrpegkevaeaiggaffqvdled
    erervrfveeaayalgrvdvlvnnaaiaapgsaltvrlpewrrvlevnltapmhlsalaa
    remrkvgggaivnvasvqglfaeqenaaynaskgglvnltrslaldlaplrirvnavapg
    aiateavleaialspdpertrrdwedlhalrrlgkpeevaeavlflasekasfitgailp
    vdggmtasfmmagrpv
    

    Sequence, based on observed residues (ATOM records): (download)
    >2d1yA (A:)
    glfagkgvlvtggargigraiaqafaregalvalcdlrpegkevaeaiggaffqvdlede
    rervrfveeaayalgrvdvlvnnaaiaapgsaltvrlpewrrvlevnltapmhlsalaar
    emrkvgggaivnvasvqglfaeqenaaynaskgglvnltrslaldlaplrirvnavapga
    iateavleaiarrdwedlhalrrlgkpeevaeavlflasekasfitgailpvdggmtasf
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >2d1yB (B:)
    mglfagkgvlvtggargigraiaqafaregalvalcdlrpegkevaeaiggaffqvdled
    erervrfveeaayalgrvdvlvnnaaiaapgsaltvrlpewrrvlevnltapmhlsalaa
    remrkvgggaivnvasvqglfaeqenaaynaskgglvnltrslaldlaplrirvnavapg
    aiateavleaialspdpertrrdwedlhalrrlgkpeevaeavlflasekasfitgailp
    vdggmtasfmmagrpv
    

    Sequence, based on observed residues (ATOM records): (download)
    >2d1yB (B:)
    glfagkgvlvtggargigraiaqafaregalvalcdlrpegkevaeaiggaffqvdlede
    rervrfveeaayalgrvdvlvnnaaiaapgsaltvrlpewrrvlevnltapmhlsalaar
    emrkvgggaivnvasvqglfaeqenaaynaskgglvnltrslaldlaplrirvnavapga
    iateavleairtrrdwedlhalrrlgkpeevaeavlflasekasfitgailpvdggmtas
    fm
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >2d1yC (C:)
    mglfagkgvlvtggargigraiaqafaregalvalcdlrpegkevaeaiggaffqvdled
    erervrfveeaayalgrvdvlvnnaaiaapgsaltvrlpewrrvlevnltapmhlsalaa
    remrkvgggaivnvasvqglfaeqenaaynaskgglvnltrslaldlaplrirvnavapg
    aiateavleaialspdpertrrdwedlhalrrlgkpeevaeavlflasekasfitgailp
    vdggmtasfmmagrpv
    

    Sequence, based on observed residues (ATOM records): (download)
    >2d1yC (C:)
    glfagkgvlvtggargigraiaqafaregalvalcdlrpegkevaeaiggaffqvdlede
    rervrfveeaayalgrvdvlvnnaaiaapgsaltvrlpewrrvlevnltapmhlsalaar
    emrkvgggaivnvasvqglfaeqenaaynaskgglvnltrslaldlaplrirvnavapga
    iateavleaialspdpertrrdwedlhalrrlgkpeevaeavlflasekasfitgailpv
    dggmtasf
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >2d1yD (D:)
    mglfagkgvlvtggargigraiaqafaregalvalcdlrpegkevaeaiggaffqvdled
    erervrfveeaayalgrvdvlvnnaaiaapgsaltvrlpewrrvlevnltapmhlsalaa
    remrkvgggaivnvasvqglfaeqenaaynaskgglvnltrslaldlaplrirvnavapg
    aiateavleaialspdpertrrdwedlhalrrlgkpeevaeavlflasekasfitgailp
    vdggmtasfmmagrpv
    

    Sequence, based on observed residues (ATOM records): (download)
    >2d1yD (D:)
    lfagkgvlvtggargigraiaqafaregalvalcdlrpegkevaeaiggaffqvdleder
    ervrfveeaayalgrvdvlvnnaaiaapgsaltvrlpewrrvlevnltapmhlsalaare
    mrkvgggaivnvasvqglfaeqenaaynaskgglvnltrslaldlaplrirvnavapgai
    ateavleaiatrrdwedlhalrrlgkpeevaeavlflasekasfitgailpvdggmtasf