PDB entry 2d0q

View 2d0q on RCSB PDB site
Description: Complex of Fe-type NHase with Cyclohexyl isocyanide, photo-activated for 1hr at 277K
Class: lyase
Keywords: cysteine-sulfinic acid, cysteine-sulfenic acid, photo-reactive, nitrile, hydration, substrate analogue, complex, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, LYASE
Deposited on 2005-08-05, released 2006-02-05
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.65 Å
R-factor: 0.154
AEROSPACI score: 0.6 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Nitrile hydratase subunit alpha
    Species: Rhodococcus erythropolis [TaxId:1833]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P13448
      • modified residue (111)
    Domains in SCOPe 2.08: d2d0qa_
  • Chain 'B':
    Compound: Nitrile hydratase subunit beta
    Species: Rhodococcus erythropolis [TaxId:1833]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2d0qb_
  • Heterogens: FE, MG, CYI, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2d0qA (A:)
svtidhttenaapaqapvsdrawalfraldgkglvpdgyvegwkktfeedfsprrgaelv
arawtdpefrqllltdgtaavaqygylgpqgeyivavedtptlknvivcslcsctawpil
glpptwyksfeyrarvvreprkvlsemgteiasdieirvydttaetrymvlpqrpagteg
wsqeqlqeivtkdcligvaipqvptv

    Sequence, based on observed residues (ATOM records): (download) 
    >2d0qA (A:)
aqapvsdrawalfraldgkglvpdgyvegwkktfeedfsprrgaelvarawtdpefrqll
ltdgtaavaqygylgpqgeyivavedtptlknvivcslcsctawpilglpptwyksfeyr
arvvreprkvlsemgteiasdieirvydttaetrymvlpqrpagtegwsqeqlqeivtkd
cligvaipqvpt

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2d0qB (B:)
mdgvhdlagvqgfgkvphtvnadigptfhaewehlpyslmfagvaelgafsvdevryvve
rmeprhymmtpyyeryvigvatlmvekgiltqdeleslaggpfplsrpsesegrpapvet
ttfevgqrvrvrdeyvpghirmpaycrgrvgtishrttekwpfpdaighgrndageepty
hvkfaaeelfgsdtdggsvvvdlfegylepaa