PDB entry 2clv
View 2clv on RCSB PDB site
Description: MHC class I natural mutant h-2kbm8 heavy chain complexed with beta-2 microglobulin and pbm8 peptide
Class: immune system
Keywords: immune response, immune system, immunoglobulin domain, glycoprotein, transmembrane, alloreactivity, MHC I, h-2kbm8, membrane, class I MHC, polymorphism
Deposited on
2006-05-02, released
2006-06-14
The last revision prior to the SCOP 1.73 freeze date was dated
2007-01-03, with a file datestamp of
2007-06-28.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.21166
AEROSPACI score: 0.46
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: h-2 class I histocompatibility antigen, k-b alpha chain
Species: MUS MUSCULUS
Database cross-references and differences (RAF-indexed):
- Uniprot P01901 (0-278)
- engineered mutation (21-23)
- engineered mutation (29)
Domains in SCOP 1.73: d2clva1, d2clva2 - Chain 'B':
Compound: beta-2 microglobulin
Species: MUS MUSCULUS
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.73: d2clvb1 - Chain 'C':
Compound: rbm5 protein
Database cross-references and differences (RAF-indexed):
- Chain 'H':
Compound: h-2 class I histocompatibility antigen, k-b alpha chain
Species: MUS MUSCULUS
Database cross-references and differences (RAF-indexed):
- Uniprot P01901 (0-278)
- engineered mutation (21-23)
- engineered mutation (29)
Domains in SCOP 1.73: d2clvh1, d2clvh2 - Chain 'M':
Compound: rbm5 protein
Database cross-references and differences (RAF-indexed):
- Chain 'P':
Compound: beta-2 microglobulin
Species: MUS MUSCULUS
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.73: d2clvp1 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>2clvA (A:)
gphslryfvtavsrpglgeprfisvgyvdntefvrfdsdaenpryeprarwmeqegpeyw
eretqkakgneqsfrvdlrtllgyynqskggshtiqvisgcevgsdgrllrgyqqyaydg
cdyialnedlktwtaadmaalitkhkweqageaerlraylegtcvewlrrylkngnatll
rtdspkahvthhsrpedkvtlrcwalgfypaditltwqlngeeliqdmelvetrpagdgt
fqkwasvvvplgkeqyytchvyhqglpepltlrweppps
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>2clvB (B:)
iqktpqiqvysrhppengkpnilncyvtqfhpphieiqmlkngkkipkvemsdmsfskdw
sfyilahteftptetdtyacrvkhdsmaepktvywdrdm
- Chain 'C':
No sequence available.
- Chain 'H':
Sequence; same for both SEQRES and ATOM records: (download)
>2clvH (H:)
gphslryfvtavsrpglgeprfisvgyvdntefvrfdsdaenpryeprarwmeqegpeyw
eretqkakgneqsfrvdlrtllgyynqskggshtiqvisgcevgsdgrllrgyqqyaydg
cdyialnedlktwtaadmaalitkhkweqageaerlraylegtcvewlrrylkngnatll
rtdspkahvthhsrpedkvtlrcwalgfypaditltwqlngeeliqdmelvetrpagdgt
fqkwasvvvplgkeqyytchvyhqglpepltlrweppps
- Chain 'M':
No sequence available.
- Chain 'P':
Sequence; same for both SEQRES and ATOM records: (download)
>2clvP (P:)
iqktpqiqvysrhppengkpnilncyvtqfhpphieiqmlkngkkipkvemsdmsfskdw
sfyilahteftptetdtyacrvkhdsmaepktvywdrdm