PDB entry 2clr
View 2clr on RCSB PDB site
Description: three dimensional structure of a peptide extending out one end of a class I MHC binding site
Class: histocompatibility antigen
Keywords: histocompatibility antigen
Deposited on
1994-08-01, released
1995-03-31
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.236
AEROSPACI score: 0.39
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: class I histocompatibility antigen (hla-a 0201) (alpha chain)
Species: Homo sapiens [TaxId:9606]
Gene: BETA-2-MICROGLOBULIN
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2clra1, d2clra2 - Chain 'B':
Compound: beta 2-microglobulin
Species: Homo sapiens [TaxId:9606]
Gene: BETA-2-MICROGLOBULIN
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2clrb2, d2clrb3 - Chain 'C':
Compound: decameric peptide from calreticulin
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'D':
Compound: class I histocompatibility antigen (hla-a 0201) (alpha chain)
Species: Homo sapiens [TaxId:9606]
Gene: BETA-2-MICROGLOBULIN
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2clrd1, d2clrd2 - Chain 'E':
Compound: beta 2-microglobulin
Species: Homo sapiens [TaxId:9606]
Gene: BETA-2-MICROGLOBULIN
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2clre2, d2clre3 - Chain 'F':
Compound: decameric peptide from calreticulin
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>2clrA (A:)
gshsmryfftsvsrpgrgeprfiavgyvddtqfvrfdsdaasqrmeprapwieqegpeyw
dgetrkvkahsqthrvdlgtlrgyynqseagshtvqrmygcdvgsdwrflrgyhqyaydg
kdyialkedlrswtaadmaaqttkhkweaahvaeqlraylegtcvewlrrylengketlq
rtdapkthmthhavsdheatlrcwalsfypaeitltwqrdgedqtqdtelvetrpagdgt
fqkwaavvvpsgqeqrytchvqheglpkpltlrwe
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>2clrB (B:)
miqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm
- Chain 'C':
No sequence available.
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>2clrD (D:)
gshsmryfftsvsrpgrgeprfiavgyvddtqfvrfdsdaasqrmeprapwieqegpeyw
dgetrkvkahsqthrvdlgtlrgyynqseagshtvqrmygcdvgsdwrflrgyhqyaydg
kdyialkedlrswtaadmaaqttkhkweaahvaeqlraylegtcvewlrrylengketlq
rtdapkthmthhavsdheatlrcwalsfypaeitltwqrdgedqtqdtelvetrpagdgt
fqkwaavvvpsgqeqrytchvqheglpkpltlrwe
- Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
>2clrE (E:)
miqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm
- Chain 'F':
No sequence available.