PDB entry 2ckb
View 2ckb on RCSB PDB site
Description: structure of the 2c/kb/dev8 complex
Class: major histocompatibility complex
Keywords: t cell antigen receptor, major histocompatibility complex
Deposited on
1998-01-14, released
1998-04-29
The last revision prior to the SCOPe 2.06 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 3 Å
R-factor: 0.221
AEROSPACI score: 0.15
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: alpha, beta t cell receptor
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- EMBL CAA25595 (0-201)
- conflict (121)
- conflict (157)
Domains in SCOPe 2.06: d2ckba1, d2ckba2 - Chain 'B':
Compound: alpha, beta t cell receptor
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- GB AAB41230 (0-236)
- conflict (95)
- conflict (97-99)
- conflict (102)
- conflict (107)
Domains in SCOPe 2.06: d2ckbb1, d2ckbb2 - Chain 'C':
Compound: alpha, beta t cell receptor
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- EMBL CAA25595 (0-201)
- conflict (121)
- conflict (157)
Domains in SCOPe 2.06: d2ckbc1, d2ckbc2 - Chain 'D':
Compound: alpha, beta t cell receptor
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- GB AAB41230 (0-236)
- conflict (95)
- conflict (97-99)
- conflict (102)
- conflict (107)
Domains in SCOPe 2.06: d2ckbd1, d2ckbd2 - Chain 'H':
Compound: major histocompatibility complex class I molecule k(b)
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2ckbh1, d2ckbh2 - Chain 'I':
Compound: major histocompatibility complex class I molecule k(b)
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2ckbi1, d2ckbi2 - Chain 'L':
Compound: beta-2 microglobulin
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2ckbl_ - Chain 'M':
Compound: beta-2 microglobulin
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2ckbm_ - Chain 'P':
Compound: dev8 peptide
Database cross-references and differences (RAF-indexed):
- Chain 'Q':
Compound: dev8 peptide
Database cross-references and differences (RAF-indexed):
- Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>2ckbA (A:)
qsvtqpdarvtvsegaslqlrckysysatpylfwyvqyprqglqlllkyysgdpvvqgvn
gfeaefsksnssfhlrkasvhwsdsavyfcavsgfasaltfgsgtkvivlpyiqnpepav
yalkdprsqdstlclftdfdsqinvpktmesgtfitdatvldmkamdsksngaiawsnqt
sftcqdifketnatypssdvpc
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>2ckbB (B:)
eaavtqsprnkvavtggkvtlscnqtnnhnnmywyrqdtghglrlihysygagstekgdi
pdgykasrpsqenfslilelatpsqtsvyfcasggggtlyfgagtrlsvledlrnvtppk
vslfepskaeiankqkatlvclargffpdhvelswwvngkevhsgvstdpqaykesnysy
clssrlrvsatfwhnprnhfrcqvqfhglseedkwpegspkpvtqnisaeawgradc
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>2ckbC (C:)
qsvtqpdarvtvsegaslqlrckysysatpylfwyvqyprqglqlllkyysgdpvvqgvn
gfeaefsksnssfhlrkasvhwsdsavyfcavsgfasaltfgsgtkvivlpyiqnpepav
yalkdprsqdstlclftdfdsqinvpktmesgtfitdatvldmkamdsksngaiawsnqt
sftcqdifketnatypssdvpc
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>2ckbD (D:)
eaavtqsprnkvavtggkvtlscnqtnnhnnmywyrqdtghglrlihysygagstekgdi
pdgykasrpsqenfslilelatpsqtsvyfcasggggtlyfgagtrlsvledlrnvtppk
vslfepskaeiankqkatlvclargffpdhvelswwvngkevhsgvstdpqaykesnysy
clssrlrvsatfwhnprnhfrcqvqfhglseedkwpegspkpvtqnisaeawgradc
- Chain 'H':
Sequence; same for both SEQRES and ATOM records: (download)
>2ckbH (H:)
gphslryfvtavsrpglgeprymevgyvddtefvrfdsdaenpryeprarwmeqegpeyw
eretqkakgneqsfrvdlrtllgyynqskggshtiqvisgcevgsdgrllrgyqqyaydg
cdyialnedlktwtaadmaalitkhkweqageaerlraylegtcvewlrrylkngnatll
rtdspkahvthhsrpedkvtlrcwalgfypaditltwqlngeeliqdmelvetrpagdgt
fqkwasvvvplgkeqyytchvyhqglpepltlrw
- Chain 'I':
Sequence; same for both SEQRES and ATOM records: (download)
>2ckbI (I:)
gphslryfvtavsrpglgeprymevgyvddtefvrfdsdaenpryeprarwmeqegpeyw
eretqkakgneqsfrvdlrtllgyynqskggshtiqvisgcevgsdgrllrgyqqyaydg
cdyialnedlktwtaadmaalitkhkweqageaerlraylegtcvewlrrylkngnatll
rtdspkahvthhsrpedkvtlrcwalgfypaditltwqlngeeliqdmelvetrpagdgt
fqkwasvvvplgkeqyytchvyhqglpepltlrw
- Chain 'L':
Sequence; same for both SEQRES and ATOM records: (download)
>2ckbL (L:)
iqktpqiqvysrhppengkpnilncyvtqfhpphieiqmlkngkkipkvemsdmsfskdw
sfyilahteftptetdtyacrvkhdsmaepktvywdrdm
- Chain 'M':
Sequence; same for both SEQRES and ATOM records: (download)
>2ckbM (M:)
iqktpqiqvysrhppengkpnilncyvtqfhpphieiqmlkngkkipkvemsdmsfskdw
sfyilahteftptetdtyacrvkhdsmaepktvywdrdm
- Chain 'P':
No sequence available.
- Chain 'Q':
No sequence available.