PDB entry 2cdq

View 2cdq on RCSB PDB site
Description: crystal structure of arabidopsis thaliana aspartate kinase complexed with lysine and s-adenosylmethionine
Class: transferase
Keywords: aspartate kinase, amino acid metabolism, act domain, allostery, s-adenosylmethionine, lysine, allosteric effector, plant, transferase, amino acid biosynthesis
Deposited on 2006-01-26, released 2006-05-30
The last revision prior to the SCOP 1.73 freeze date was dated 2006-07-03, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.85 Å
R-factor: 0.20394
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: aspartokinase
    Species: Arabidopsis thaliana
    Database cross-references and differences (RAF-indexed):
    • PDB 2CDQ
    • PDB 2CDQ
    Domains in SCOP 1.73: d2cdqa1, d2cdqa2, d2cdqa3
  • Chain 'B':
    Compound: aspartokinase
    Species: Arabidopsis thaliana
    Database cross-references and differences (RAF-indexed):
    • PDB 2CDQ
    • PDB 2CDQ
    Domains in SCOP 1.73: d2cdqb1, d2cdqb2, d2cdqb3
  • Heterogens: TAR, SAM, LYS, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2cdqA (A:)
mgsrnivravleekkteaitevdekgitcvmkfggssvasaermkevadliltfpeespv
ivlsamgkttnnlllagekavscgvsnaseieelsiikelhirtvkelnidpsviltyle
eleqllkgiammkeltlrtrdylvsfgeclstrifaaylntigvkarqydafeigfittd
dftngdileatypavakrlyddwmhdpavpivtgflgkgwktgavttlgrggsdltatti
gkalglkeiqvwkdvdgvltcdptiykratpvpyltfdeaaelayfgaqvlhpqsmrpar
egeipvrvknsynpkapgtiitktrdmtksiltsivlkrnvtmldiastrmlgqvgflak
vfsifeelgisvdvvatsevsisltldpsklwsreliqqeldhvveelekiavvnllkgr
aiislignvqhsslilerafhvlytkgvnvqmisqgaskvnisfivneaeaegcvqalhk
sffesgdlselliqprlgngspvrtlqven

    Sequence, based on observed residues (ATOM records): (download) 
    >2cdqA (A:)
kgitcvmkfggssvasaermkevadliltfpeespvivlsamgkttnnlllagekavscg
vsnaseieelsiikelhirtvkelnidpsviltyleeleqllkgiammkeltlrtrdylv
sfgeclstrifaaylntigvkarqydafeigfittddftngdileatypavakrlyddwm
hdpavpivtgflgkgwktgavttlgrggsdltattigkalglkeiqvwkdvdgvltcdpt
iykratpvpyltfdeaaelayfgaqvlhpqsmrparegeipvrvknsynpkapgtiitkt
rdmtksiltsivlkrnvtmldiastrmlgqvgflakvfsifeelgisvdvvatsevsisl
tldpsklwsreliqqeldhvveelekiavvnllkgraiislignvqhsslilerafhvly
tkgvnvqmisqgaskvnisfivneaeaegcvqalhksffesgdlselliq

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2cdqB (B:)
mgsrnivravleekkteaitevdekgitcvmkfggssvasaermkevadliltfpeespv
ivlsamgkttnnlllagekavscgvsnaseieelsiikelhirtvkelnidpsviltyle
eleqllkgiammkeltlrtrdylvsfgeclstrifaaylntigvkarqydafeigfittd
dftngdileatypavakrlyddwmhdpavpivtgflgkgwktgavttlgrggsdltatti
gkalglkeiqvwkdvdgvltcdptiykratpvpyltfdeaaelayfgaqvlhpqsmrpar
egeipvrvknsynpkapgtiitktrdmtksiltsivlkrnvtmldiastrmlgqvgflak
vfsifeelgisvdvvatsevsisltldpsklwsreliqqeldhvveelekiavvnllkgr
aiislignvqhsslilerafhvlytkgvnvqmisqgaskvnisfivneaeaegcvqalhk
sffesgdlselliqprlgngspvrtlqven

    Sequence, based on observed residues (ATOM records): (download) 
    >2cdqB (B:)
kgitcvmkfggssvasaermkevadliltfpeespvivlsamgkttnnlllagekavscg
vsnaseieelsiikelhirtvkelnidpsviltyleeleqllkgiammkeltlrtrdylv
sfgeclstrifaaylntigvkarqydafeigfittddftngdileatypavakrlyddwm
hdpavpivtgflgkgwktgavttlgrggsdltattigkalglkeiqvwkdvdgvltcdpt
iykratpvpyltfdeaaelayfgaqvlhpqsmrparegeipvrvknsynpkapgtiitkt
rdmtksiltsivlkrnvtmldiastrmlgqvgflakvfsifeelgisvdvvatsevsisl
tldpsklwsreliqqeldhvveelekiavvnllkgraiislignvqhsslilerafhvly
tkgvnvqmisqgaskvnisfivneaeaegcvqalhksffesgdlselliq