PDB entry 2cdg

View 2cdg on RCSB PDB site
Description: structure and binding kinetics of three different human cd1d-alpha-galactosylceramide-specific t cell receptors (tcr 5b)
Class: receptor
Keywords: receptor, cd1d, MHC class I, tcr 5b
Deposited on 2006-01-23, released 2006-03-07
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-31.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.222
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: tcr 5e
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 2CDG (0-183)
    Domains in SCOPe 2.08: d2cdga1, d2cdga2
  • Chain 'B':
    Compound: tcr 5e
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 2CDG (0-243)
    Domains in SCOPe 2.08: d2cdgb1, d2cdgb2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2cdgA (A:)
qalsiqegenatmncsyktsinnlqwyrqnsgrglvhlilirsnerekhsgrlrvtldts
kksssllitasraadtasyfcapfdrgstlgrlyfgrgtqltvwpdiqnpdpavyqlrds
kssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsnksdfacan
afnn

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2cdgB (B:)
adiyqtprylvigtgkkitlecsqtmghdkmywyqqdpgmelhlihysygvnstekgdls
sestvsrirtehfpltlesarpshtsqylcassesrtginygytfgsgtrltvvedlnkv
fppevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeq
palndsryalssrlrvsatfwqdprnhfrcqvqfyglsendewtqdrakpvtqivsaeaw
grad