PDB entry 2c8m

View 2c8m on RCSB PDB site
Description: structure of protein ta0514, putative lipoate protein ligase from t. acidophilum with bound lipoic acid
Class: ligase
Keywords: lipoylation, ligase
Deposited on 2005-12-06, released 2005-12-15
The last revision prior to the SCOP 1.75 freeze date was dated 2006-02-01, with a file datestamp of 2007-06-28.
Experiment type: XRAY
Resolution: 1.89 Å
R-factor: 0.208
AEROSPACI score: 0.56 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Lipoate-protein ligase A
    Species: Thermoplasma acidophilum
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2c8ma1
  • Chain 'B':
    Compound: Lipoate-protein ligase A
    Species: Thermoplasma acidophilum
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2c8mb1
  • Chain 'C':
    Compound: Lipoate-protein ligase A
    Species: Thermoplasma acidophilum
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2c8mc1
  • Chain 'D':
    Compound: Lipoate-protein ligase A
    Species: Thermoplasma acidophilum
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2c8md1
  • Heterogens: LPA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2c8mA (A:)
megrlllletpgntrmslaydeaiyrsfqygdkpilrfyrhdrsviigyfqvaeeevdld
ymkkngimlarrytgggavyhdlgdlnfsvvrssddmditsmfrtmneavvnslrilgld
arpgelndvsipvnkktdimagekkimgaagamrkgaklwhaamlvhtdldmlsavlkvp
dekfrdkiakstrervanvtdfvdvsidevrnalirgfsetlhidfredtitekeeslar
elfdkkysteewnmgllrkevv

    Sequence, based on observed residues (ATOM records): (download) 
    >2c8mA (A:)
megrlllletpgntrmslaydeaiyrsfqygdkpilrfyrhdrsviigyfqvaeeevdld
ymkkngimlarrytgggavyhdlgdlnfsvvrssddmditsmfrtmneavvnslrilgld
arpgelndvsipvnkktdimagekkimgaagamrkgaklwhaamlvhtdldmlsavlker
vanvtdfvdvsidevrnalirgfsetlhidfredtitekeeslarelfdkkysteewnmg
l

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2c8mB (B:)
megrlllletpgntrmslaydeaiyrsfqygdkpilrfyrhdrsviigyfqvaeeevdld
ymkkngimlarrytgggavyhdlgdlnfsvvrssddmditsmfrtmneavvnslrilgld
arpgelndvsipvnkktdimagekkimgaagamrkgaklwhaamlvhtdldmlsavlkvp
dekfrdkiakstrervanvtdfvdvsidevrnalirgfsetlhidfredtitekeeslar
elfdkkysteewnmgllrkevv

    Sequence, based on observed residues (ATOM records): (download) 
    >2c8mB (B:)
megrlllletpgntrmslaydeaiyrsfqygdkpilrfyrhdrsviigyfqvaeeevdld
ymkkngimlarrytgggavyhdlgdlnfsvvrssddmditsmfrtmneavvnslrilgld
arpgelndvsipvnkktdimagekkimgaagamrkgaklwhaamlvhtdldmlsavlkst
rervanvtdfvdvsidevrnalirgfsetlhidfredtitekeeslarelfdkkysteew
nmgll

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2c8mC (C:)
megrlllletpgntrmslaydeaiyrsfqygdkpilrfyrhdrsviigyfqvaeeevdld
ymkkngimlarrytgggavyhdlgdlnfsvvrssddmditsmfrtmneavvnslrilgld
arpgelndvsipvnkktdimagekkimgaagamrkgaklwhaamlvhtdldmlsavlkvp
dekfrdkiakstrervanvtdfvdvsidevrnalirgfsetlhidfredtitekeeslar
elfdkkysteewnmgllrkevv

    Sequence, based on observed residues (ATOM records): (download) 
    >2c8mC (C:)
megrlllletpgntrmslaydeaiyrsfqygdkpilrfyrhdrsviigyfqvaeeevdld
ymkkngimlarrytgggavyhdlgdlnfsvvrssddmditsmfrtmneavvnslrilgld
arpgelndvsipvnkktdimagekkimgaagamrkgaklwhaamlvhtdldmlsavlkst
rervanvtdfvdvsidevrnalirgfsetlhidfredtitekeeslarelfdkkysteew
nmgll

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2c8mD (D:)
megrlllletpgntrmslaydeaiyrsfqygdkpilrfyrhdrsviigyfqvaeeevdld
ymkkngimlarrytgggavyhdlgdlnfsvvrssddmditsmfrtmneavvnslrilgld
arpgelndvsipvnkktdimagekkimgaagamrkgaklwhaamlvhtdldmlsavlkvp
dekfrdkiakstrervanvtdfvdvsidevrnalirgfsetlhidfredtitekeeslar
elfdkkysteewnmgllrkevv

    Sequence, based on observed residues (ATOM records): (download) 
    >2c8mD (D:)
megrlllletpgntrmslaydeaiyrsfqygdkpilrfyrhdrsviigyfqvaeeevdld
ymkkngimlarrytgggavyhdlgdlnfsvvrssddmditsmfrtmneavvnslrilgld
arpgelndvsipvnkktdimagekkimgaagamrkgaklwhaamlvhtdldmlsavlkre
rvanvtdfvdvsidevrnalirgfsetlhidfredtitekeeslarelfdkkysteewnm
g