PDB entry 2c7n

View 2c7n on RCSB PDB site
Description: Human Rabex-5 residues 1-74 in complex with Ubiquitin
Class: protein binding
Keywords: protein-binding, ubiquitin binding domain, endocytosis, nuclear protein, polyprotein, ubiquitin complex, protein binding
Deposited on 2005-11-25, released 2006-02-15
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-05-08, with a file datestamp of 2019-05-03.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: rab guanine nucleotide exchange factor 1
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2c7na1
  • Chain 'B':
    Compound: Ubiquitin
    Species: BOS TAURUS, synthetic [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2c7nb1
  • Chain 'C':
    Compound: rab guanine nucleotide exchange factor 1
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2c7nc1
  • Chain 'D':
    Compound: Ubiquitin
    Species: BOS TAURUS, synthetic [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2c7nd1
  • Chain 'E':
    Compound: rab guanine nucleotide exchange factor 1
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Ubiquitin
    Species: BOS TAURUS, synthetic [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2c7nf1
  • Chain 'G':
    Compound: rab guanine nucleotide exchange factor 1
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2c7ng1
  • Chain 'H':
    Compound: Ubiquitin
    Species: BOS TAURUS, synthetic [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2c7nh1
  • Chain 'I':
    Compound: rab guanine nucleotide exchange factor 1
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2c7ni1
  • Chain 'J':
    Compound: Ubiquitin
    Species: BOS TAURUS, synthetic [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2c7nj1
  • Chain 'K':
    Compound: rab guanine nucleotide exchange factor 1
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'L':
    Compound: Ubiquitin
    Species: BOS TAURUS, synthetic [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2c7nl1
  • Heterogens: ZN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2c7nA (A:)
mslkserrgihvdqsdllckkgcgyygnpawqgfcskcwreeyhkarqkqiqedwelaer
lqreeeeafassqs

    Sequence, based on observed residues (ATOM records): (download) 
    >2c7nA (A:)
lckkgcgyygnpawqgfcskcwreeyhkarqkqiqedwelaerlqreeeeafassq

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2c7nB (B:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg

    Sequence, based on observed residues (ATOM records): (download) 
    >2c7nB (B:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlr

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2c7nC (C:)
mslkserrgihvdqsdllckkgcgyygnpawqgfcskcwreeyhkarqkqiqedwelaer
lqreeeeafassqs

    Sequence, based on observed residues (ATOM records): (download) 
    >2c7nC (C:)
llckkgcgyygnpawqgfcskcwreeyhkarqkqiqedwelaerlqreeeeafassq

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2c7nD (D:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg

    Sequence, based on observed residues (ATOM records): (download) 
    >2c7nD (D:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlr

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >2c7nF (F:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg

    Sequence, based on observed residues (ATOM records): (download) 
    >2c7nF (F:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlr

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >2c7nG (G:)
mslkserrgihvdqsdllckkgcgyygnpawqgfcskcwreeyhkarqkqiqedwelaer
lqreeeeafassqs

    Sequence, based on observed residues (ATOM records): (download) 
    >2c7nG (G:)
llckkgcgyygnpawqgfcskcwreeyhkarqkqiqedwelaerlqreeeeafas

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >2c7nH (H:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg

    Sequence, based on observed residues (ATOM records): (download) 
    >2c7nH (H:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrl

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >2c7nI (I:)
mslkserrgihvdqsdllckkgcgyygnpawqgfcskcwreeyhkarqkqiqedwelaer
lqreeeeafassqs

    Sequence, based on observed residues (ATOM records): (download) 
    >2c7nI (I:)
llckkgcgyygnpawqgfcskcwreeyhkarqkqiqedwelaerlqreeeeafassqs

  • Chain 'J':
    Sequence, based on SEQRES records: (download) 
    >2c7nJ (J:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg

    Sequence, based on observed residues (ATOM records): (download) 
    >2c7nJ (J:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlr

  • Chain 'K':
    No sequence available.

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >2c7nL (L:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg

    Sequence, based on observed residues (ATOM records): (download) 
    >2c7nL (L:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlr