PDB entry 2c6j

View 2c6j on RCSB PDB site
Description: structure of p. knowlesi dbl domain capable of binding human duffy antigen
Class: receptor
Keywords: receptor, duffy antigen, dbl domain, p.knowlesi, p.vivax, invasion, malaria
Deposited on 2005-11-10, released 2006-01-04
Made obsolete by 5x6n on 2017-03-08

The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 3 Å
R-factor: 0.2479
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: duffy receptor, alpha form
    Species: Plasmodium knowlesi [TaxId:5850]
    Database cross-references and differences (RAF-indexed):
    • PDB 2C6J
      • conflict (38)
      • conflict (47)
      • conflict (132-133)
    • Uniprot P22545
    Domains in SCOPe 2.06: d2c6ja1
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2c6jA (A:)
mvinqtflqnnvmdkcndkrkrgerdwdcpaekdicisdrryqlcmkeltnlvnntrths
hnditflklnlkrklmydaavegdlllkknnyqynkefckdirwglgdfgdiimgtnmeg
igysqvvennlrsifgtdekakqdrkqwwneskehiwrammfslrsrlkekfvwickkdv
tlkvepqiyrwirewgrdymselpkeqgklnekcasklyynnmaicmlplchdacksydq
witrkkkqwdvlstkfssvkktqkigteniataydilkqelngfkeatfeneinkrdnly
nhlcpcvveearkntqenvknvgsgveskaassnpite

    Sequence, based on observed residues (ATOM records): (download) 
    >2c6jA (A:)
kcndkrkrgerdwdcpaekdicisdrryqlcmkeltnlitflklnlkrklmydaavegdl
llkknnyqynkefckdirwglgdfgdiimgtnmegvennlrsifgtdekakqdrkqwwne
skehiwrammfslrsrlkekfvwickkdvpqiyrwirewgrdymselpkeqgklnekcas
klyynnmaicmlplchdacksydqwitrkkkqwdvlstkfssvkktniataydilkqeln
gfkeatfeneinkrdnlynhlcpcvv