PDB entry 2c5r
View 2c5r on RCSB PDB site
Description: the structure of phage phi29 replication organizer protein p16.7 in complex with double stranded DNA
Class: DNA-binding protein/DNA
Keywords: DNA-binding protein-DNA complex, DNA-binding protein, complex (DNA-binding protein-DNA)
Deposited on
2005-10-31, released
2005-11-08
The last revision prior to the SCOPe 2.08 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-31.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: 0.254
AEROSPACI score: 0.18
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: early protein p16.7
Species: BACILLUS PHAGE PHI29 [TaxId:10756]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2c5ra1 - Chain 'B':
Compound: early protein p16.7
Species: BACILLUS PHAGE PHI29 [TaxId:10756]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2c5rb_ - Chain 'C':
Compound: early protein p16.7
Species: BACILLUS PHAGE PHI29 [TaxId:10756]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2c5rc_ - Chain 'D':
Compound: early protein p16.7
Species: BACILLUS PHAGE PHI29 [TaxId:10756]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2c5rd_ - Chain 'E':
Compound: early protein p16.7
Species: BACILLUS PHAGE PHI29 [TaxId:10756]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2c5re_ - Chain 'F':
Compound: early protein p16.7
Species: BACILLUS PHAGE PHI29 [TaxId:10756]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2c5rf_ - Chain 'Y':
Compound: 5'-d(*tp*cp*cp*ap*cp*cp*gp*gp)-3'
- Chain 'Z':
Compound: 5'-d(*cp*cp*gp*gp*tp*gp*gp*ap)-3'
- Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2c5rA (A:)
ktvnlsacevavldlyeqsniripsdiiedlvnqrlqseqevlnyietqrtywklenqkk
lyrgslk
Sequence, based on observed residues (ATOM records): (download)
>2c5rA (A:)
nlsacevavldlyeqsniripsdiiedlvnqrlqseqevlnyietqrtywklenqkklyr
gslk
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2c5rB (B:)
ktvnlsacevavldlyeqsniripsdiiedlvnqrlqseqevlnyietqrtywklenqkk
lyrgslk
Sequence, based on observed residues (ATOM records): (download)
>2c5rB (B:)
nlsacevavldlyeqsniripsdiiedlvnqrlqseqevlnyietqrtywklenqkklyr
gslk
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2c5rC (C:)
ktvnlsacevavldlyeqsniripsdiiedlvnqrlqseqevlnyietqrtywklenqkk
lyrgslk
Sequence, based on observed residues (ATOM records): (download)
>2c5rC (C:)
nlsacevavldlyeqsniripsdiiedlvnqrlqseqevlnyietqrtywklenqkklyr
gslk
- Chain 'D':
Sequence, based on SEQRES records: (download)
>2c5rD (D:)
ktvnlsacevavldlyeqsniripsdiiedlvnqrlqseqevlnyietqrtywklenqkk
lyrgslk
Sequence, based on observed residues (ATOM records): (download)
>2c5rD (D:)
nlsacevavldlyeqsniripsdiiedlvnqrlqseqevlnyietqrtywklenqkklyr
gslk
- Chain 'E':
Sequence, based on SEQRES records: (download)
>2c5rE (E:)
ktvnlsacevavldlyeqsniripsdiiedlvnqrlqseqevlnyietqrtywklenqkk
lyrgslk
Sequence, based on observed residues (ATOM records): (download)
>2c5rE (E:)
nlsacevavldlyeqsniripsdiiedlvnqrlqseqevlnyietqrtywklenqkklyr
gslk
- Chain 'F':
Sequence, based on SEQRES records: (download)
>2c5rF (F:)
ktvnlsacevavldlyeqsniripsdiiedlvnqrlqseqevlnyietqrtywklenqkk
lyrgslk
Sequence, based on observed residues (ATOM records): (download)
>2c5rF (F:)
nlsacevavldlyeqsniripsdiiedlvnqrlqseqevlnyietqrtywklenqkklyr
gslk
- Chain 'Y':
No sequence available.
- Chain 'Z':
No sequence available.