PDB entry 2c5c

View 2c5c on RCSB PDB site
Description: shiga-like toxin 1 b subunit complexed with a bivalent inhibitor
Class: toxin
Keywords: bacterial exotoxin, gb3 binding activity, bivalent ligand, protein-carbohydrate recognition, ob fold, toxin
Deposited on 2005-10-26, released 2006-11-27
The last revision prior to the SCOP 1.73 freeze date was dated 2006-11-27, with a file datestamp of 2007-06-28.
Experiment type: XRAY
Resolution: 2.94 Å
R-factor: 0.201
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: shiga-like toxin 1 b subunit
    Species: Bacteriophage H30
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d2c5ca1
  • Chain 'B':
    Compound: shiga-like toxin 1 b subunit
    Species: Bacteriophage H30
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d2c5cb1
  • Chain 'C':
    Compound: shiga-like toxin 1 b subunit
    Species: Bacteriophage H30
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d2c5cc1
  • Chain 'D':
    Compound: shiga-like toxin 1 b subunit
    Species: Bacteriophage H30
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d2c5cd1
  • Chain 'E':
    Compound: shiga-like toxin 1 b subunit
    Species: Bacteriophage H30
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d2c5ce1
  • Chain 'F':
    Compound: shiga-like toxin 1 b subunit
    Species: Bacteriophage H30
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d2c5cf1
  • Chain 'G':
    Compound: shiga-like toxin 1 b subunit
    Species: Bacteriophage H30
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d2c5cg1
  • Chain 'H':
    Compound: shiga-like toxin 1 b subunit
    Species: Bacteriophage H30
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d2c5ch1
  • Chain 'I':
    Compound: shiga-like toxin 1 b subunit
    Species: Bacteriophage H30
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d2c5ci1
  • Chain 'J':
    Compound: shiga-like toxin 1 b subunit
    Species: Bacteriophage H30
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d2c5cj1
  • Heterogens: GLA, SO4, S10, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2c5cA (A:)
    tpdcvtgkveytkyndddtftvkvgdkelftnrwnlqslllsaqitgmtvtiktnachng
    ggfsevifr
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2c5cB (B:)
    tpdcvtgkveytkyndddtftvkvgdkelftnrwnlqslllsaqitgmtvtiktnachng
    ggfsevifr
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2c5cC (C:)
    tpdcvtgkveytkyndddtftvkvgdkelftnrwnlqslllsaqitgmtvtiktnachng
    ggfsevifr
    

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2c5cD (D:)
    tpdcvtgkveytkyndddtftvkvgdkelftnrwnlqslllsaqitgmtvtiktnachng
    ggfsevifr
    

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2c5cE (E:)
    tpdcvtgkveytkyndddtftvkvgdkelftnrwnlqslllsaqitgmtvtiktnachng
    ggfsevifr
    

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2c5cF (F:)
    tpdcvtgkveytkyndddtftvkvgdkelftnrwnlqslllsaqitgmtvtiktnachng
    ggfsevifr
    

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2c5cG (G:)
    tpdcvtgkveytkyndddtftvkvgdkelftnrwnlqslllsaqitgmtvtiktnachng
    ggfsevifr
    

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2c5cH (H:)
    tpdcvtgkveytkyndddtftvkvgdkelftnrwnlqslllsaqitgmtvtiktnachng
    ggfsevifr
    

  • Chain 'I':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2c5cI (I:)
    tpdcvtgkveytkyndddtftvkvgdkelftnrwnlqslllsaqitgmtvtiktnachng
    ggfsevifr
    

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2c5cJ (J:)
    tpdcvtgkveytkyndddtftvkvgdkelftnrwnlqslllsaqitgmtvtiktnachng
    ggfsevifr