PDB entry 2bvl

View 2bvl on RCSB PDB site
Description: Crystal structure of the catalytic domain of toxin B from Clostridium difficile in complex with UDP, Glc and manganese ion
Class: toxin
Keywords: toxin, glycosyltransferase
Deposited on 2005-06-30, released 2005-08-03
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: N/A
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: toxin b
    Species: CLOSTRIDIUM DIFFICILE [TaxId:1496]
    Database cross-references and differences (RAF-indexed):
    • PDB 2BVL (0-0)
      • engineered mutation (58)
      • engineered mutation (243)
      • engineered mutation (541)
    • Uniprot P18177 (1-542)
    Domains in SCOPe 2.08: d2bvla1
  • Heterogens: MN, UDP, GLC, SO4, TBR, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2bvlA (A:)
mslvnrkqlekmanvrfrtqedeyvaildaleeyhnmsentvvekylklkdinsltdici
dtykksgrnkalkkfkeylvtevlelknnnltpveknlhfvwiggqindtainyinqwkd
vnsdynvnvfydsnaflintlkktvvesaindtlesfrenlndprfdynkffrkrmeiiy
dkqknfinyykaqreenpeliiddivktylsneyskeidelntyieeslnkitqnsgndv
rnfgefkngesfnlyeqelverwnlaaasdilrisalkeiggmyldvdmlpgiqpdlfes
iekpssvtvdfwemtkleaimkykeyipeytsehfdmldeevqssfesvlasksdkseif
sslgdmeasplevkiafnskgiinqglisvkdsycsnlivkqienrykilnnslnpaise
dndfntttntfidsimaeanadngrfmmelgkylrvgffpdvkttinlsgpeayaaayqd
llmfkegsmnihlieadlrnfeisktnisqsteqemaslwsfddarakaqfeeykrnyfe
gal