SCOPe 2.05: Structural Classification of Proteins

PDB entry 2btv

View 2btv on RCSB PDB site
Description: atomic model for bluetongue virus (btv) core
Class: Virus
Keywords: VIRUS/VIRAL PROTEIN, Icosahedral virus
Deposited on 1998-09-05, released 1998-09-30
The last revision prior to the SCOPe 2.05 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-07.
Experiment type: XRAY
Resolution: 3.5 Å
R-factor: 0.266
AEROSPACI score: 0.1 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: protein (vp3 core protein)
Species: Bluetongue virus (serotype 1 / isolate South Africa) [TaxId:10905]
Database cross-references and differences (RAF-indexed):
- Uniprot P56582 (Start-900)
  - conflict (76)
  - conflict (212)
  - conflict (219)
  - conflict (771-772)
Domains in SCOPe 2.05: d2btva_
Chain 'B':
Compound: protein (vp3 core protein)
Species: Bluetongue virus (serotype 1 / isolate South Africa) [TaxId:10905]
Database cross-references and differences (RAF-indexed):
- Uniprot P56582 (Start-900)
  - conflict (76)
  - conflict (212)
  - conflict (219)
  - conflict (771-772)
Domains in SCOPe 2.05: d2btvb_
Chain 'C':
Compound: protein (vp7 core protein)
Species: Bluetongue virus (serotype 1 / isolate South Africa) [TaxId:10905]
Database cross-references and differences (RAF-indexed):
- Uniprot P18259 (0-348)
  - conflict (277)
Domains in SCOPe 2.05: d2btvc1, d2btvc2
Chain 'D':
Compound: protein (vp7 core protein)
Species: Bluetongue virus (serotype 1 / isolate South Africa) [TaxId:10905]
Database cross-references and differences (RAF-indexed):
- Uniprot P18259 (0-348)
  - conflict (277)
Domains in SCOPe 2.05: d2btvd1, d2btvd2
Chain 'E':
Compound: protein (vp7 core protein)
Species: Bluetongue virus (serotype 1 / isolate South Africa) [TaxId:10905]
Database cross-references and differences (RAF-indexed):
- Uniprot P18259 (0-348)
  - conflict (277)
Domains in SCOPe 2.05: d2btve1, d2btve2
Chain 'F':
Compound: protein (vp7 core protein)
Species: Bluetongue virus (serotype 1 / isolate South Africa) [TaxId:10905]
Database cross-references and differences (RAF-indexed):
- Uniprot P18259 (0-348)
  - conflict (277)
Domains in SCOPe 2.05: d2btvf1, d2btvf2
Chain 'G':
Compound: protein (vp7 core protein)
Species: Bluetongue virus (serotype 1 / isolate South Africa) [TaxId:10905]
Database cross-references and differences (RAF-indexed):
- Uniprot P18259 (0-348)
  - conflict (277)
Domains in SCOPe 2.05: d2btvg1, d2btvg2
Chain 'H':
Compound: protein (vp7 core protein)
Species: Bluetongue virus (serotype 1 / isolate South Africa) [TaxId:10905]
Database cross-references and differences (RAF-indexed):
- Uniprot P18259 (0-348)
  - conflict (277)
Domains in SCOPe 2.05: d2btvh1, d2btvh2
Chain 'I':
Compound: protein (vp7 core protein)
Species: Bluetongue virus (serotype 1 / isolate South Africa) [TaxId:10905]
Database cross-references and differences (RAF-indexed):
- Uniprot P18259 (0-348)
  - conflict (277)
Domains in SCOPe 2.05: d2btvi1, d2btvi2
Chain 'J':
Compound: protein (vp7 core protein)
Species: Bluetongue virus (serotype 1 / isolate South Africa) [TaxId:10905]
Database cross-references and differences (RAF-indexed):
- Uniprot P18259 (0-348)
  - conflict (277)
Domains in SCOPe 2.05: d2btvj1, d2btvj2
Chain 'P':
Compound: protein (vp7 core protein)
Species: Bluetongue virus (serotype 1 / isolate South Africa) [TaxId:10905]
Database cross-references and differences (RAF-indexed):
- Uniprot P18259 (0-348)
  - conflict (277)
Domains in SCOPe 2.05: d2btvp1, d2btvp2
Chain 'Q':
Compound: protein (vp7 core protein)
Species: Bluetongue virus (serotype 1 / isolate South Africa) [TaxId:10905]
Database cross-references and differences (RAF-indexed):
- Uniprot P18259 (0-348)
  - conflict (277)
Domains in SCOPe 2.05: d2btvq1, d2btvq2
Chain 'R':
Compound: protein (vp7 core protein)
Species: Bluetongue virus (serotype 1 / isolate South Africa) [TaxId:10905]
Database cross-references and differences (RAF-indexed):
- Uniprot P18259 (0-348)
  - conflict (277)
Domains in SCOPe 2.05: d2btvr1, d2btvr2
Chain 'S':
Compound: protein (vp7 core protein)
Species: Bluetongue virus (serotype 1 / isolate South Africa) [TaxId:10905]
Database cross-references and differences (RAF-indexed):
- Uniprot P18259 (0-348)
  - conflict (277)
Domains in SCOPe 2.05: d2btvs1, d2btvs2
Chain 'T':
Compound: protein (vp7 core protein)
Species: Bluetongue virus (serotype 1 / isolate South Africa) [TaxId:10905]
Database cross-references and differences (RAF-indexed):
- Uniprot P18259 (0-348)
  - conflict (277)
Domains in SCOPe 2.05: d2btvt1, d2btvt2

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>2btvA (A:)
maaqneqrperikttpylegdvlssdsgpllsvfalqeimqkvrqvqadymtatrevdft
vpdvqqilddikalaaeqvykivkvpstsfrhivtqsrdrvlrvdtyyeemsqvgdvite
depekfystiikkvrfirgkgsfilhdipardhrgmevaepevlgvefknvlpvltaehr
amiqnaldgsiiengnvatrdvdvfigacsepiyriynrlqgyieavqlqelrnsigwle
rlgqrkritysqevltdfrrqdmiwvlalqlpvnpqvvwdvprssianlimniatclptg
eyiapnprissitltqritttgpfailtgstptaqqlndvrkiylalmfpgqiildlkid
pgermdpavrmvagvvghllftaggrftnltqnmarqldialndyllymyntrvqvnygp
tgepldfqigrnqydcnvfradfatgtgyngwatidveyrdpapyvhaqryirycgidsr
elinpttygigmtyhcynemlrmlvaagkdseaayfrsmlpfhmvrfarinqiinedlhs
vfslpddmfnallpdliagahqnadpvvldvswislwfafnrsfepthrnemleiaplie
svyaselsvmkvdmrhlslmqrrfpdvliqarpshfwkavlndspeavkavmnlshshnf
inirdmmrwvllpslqpslklvleeeawaaandfedlmltdqvymhrdmlpeprlddier
frqegfyytnmleappeidrvvqytyeiarlqanmgqfraalrrimddddwvrfggvlrt
vrvkffdarppddilqglpfsydtnekgglsyatikyatettifyliynvefsntpdslv
linptytmtkvfinkrivervrvgqilavlnrrfvaykgkmrimditqslkmgtklaapt
v

Sequence, based on observed residues (ATOM records): (download)

>2btvA (A:)
vdftvpdvqqilddikalaaeqvykivkvpstsfrhivtqsrdrvlrvdtyyeemsqvgd
vitedepekfystiikkvrfirgkgsfilhdipardhrgmevaepevlgvefknvlpvlt
aehramiqnaldgsiiengnvatrdvdvfigacsepiyriynrlqgyieavqlqelrnsi
gwlerlgqrkritysqevltdfrrqdmiwvlalqlpvnpqvvwdvprssianlimniatc
lptgeyiapnprissitltqritttgpfailtgstptaqqlndvrkiylalmfpgqiild
lkidpgermdpavrmvagvvghllftaggrftnltqnmarqldialndyllymyntrvqv
nygptgepldfqigrnqydcnvfradfatgtgyngwatidveyrdpapyvhaqryirycg
idsrelinpttygigmtyhcynemlrmlvaagkdseaayfrsmlpfhmvrfarinqiine
dlhsvfslpddmfnallpdliagahqnadpvvldvswislwfafnrsfepthrnemleia
pliesvyaselsvmkvdmrhlslmqrrfpdvliqarpshfwkavlndspeavkavmnlsh
shnfinirdmmrwvllpslqpslklvleeeawaaandfedlmltdqvymhrdmlpeprld
dierfrqegfyytnmleappeidrvvqytyeiarlqanmgqfraalrrimddddwvrfgg
vlrtvrvkffdarppddilqglpfsydtnekgglsyatikyatettifyliynvefsntp
dslvlinptytmtkvfinkrivervrvgqilavlnrrfvaykgkmrimditqslkmgtkl
aaptv

Chain 'B':
Sequence, based on SEQRES records: (download)

>2btvB (B:)
maaqneqrperikttpylegdvlssdsgpllsvfalqeimqkvrqvqadymtatrevdft
vpdvqqilddikalaaeqvykivkvpstsfrhivtqsrdrvlrvdtyyeemsqvgdvite
depekfystiikkvrfirgkgsfilhdipardhrgmevaepevlgvefknvlpvltaehr
amiqnaldgsiiengnvatrdvdvfigacsepiyriynrlqgyieavqlqelrnsigwle
rlgqrkritysqevltdfrrqdmiwvlalqlpvnpqvvwdvprssianlimniatclptg
eyiapnprissitltqritttgpfailtgstptaqqlndvrkiylalmfpgqiildlkid
pgermdpavrmvagvvghllftaggrftnltqnmarqldialndyllymyntrvqvnygp
tgepldfqigrnqydcnvfradfatgtgyngwatidveyrdpapyvhaqryirycgidsr
elinpttygigmtyhcynemlrmlvaagkdseaayfrsmlpfhmvrfarinqiinedlhs
vfslpddmfnallpdliagahqnadpvvldvswislwfafnrsfepthrnemleiaplie
svyaselsvmkvdmrhlslmqrrfpdvliqarpshfwkavlndspeavkavmnlshshnf
inirdmmrwvllpslqpslklvleeeawaaandfedlmltdqvymhrdmlpeprlddier
frqegfyytnmleappeidrvvqytyeiarlqanmgqfraalrrimddddwvrfggvlrt
vrvkffdarppddilqglpfsydtnekgglsyatikyatettifyliynvefsntpdslv
linptytmtkvfinkrivervrvgqilavlnrrfvaykgkmrimditqslkmgtklaapt
v

Sequence, based on observed residues (ATOM records): (download)

>2btvB (B:)
qrperikttpylegdvlssdsgpllsvfalqeimqkvrqvqadymtatrevdftvpdvqq
ilddikalaaeqvykivkvpstsfrhivtqsrdrvlrvdtyyeemsqvgdvitedepekf
ystiikkvrfirgkgsfilhdipardhrgmevaepevlgvefknvlpvltaehramiqna
ldgsiiengnvatrdvdvfigacsepiyriynrlqgyieavqlqelrnsigwlerlgqrk
ritysqevltdfrrqdmiwvlalqlpvnpqvvwdvprssianlimniatclptgeyiapn
prissitltqritttgpfailtgstptaqqlndvrkiylalmfpgqiildlkidpgermd
pavrmvagvvghllftaggrftnltqnmarqldialndyllymyntrvqvnygptgepld
fqigrnqydcnvfradfatgtgyngwatidveyrdpapyvhaqryirycgidsrelinpt
tygigmtyhcynemlrmlvaagkdseaayfrsmlpfhmvrfarinqiinedlhsvfslpd
dmfnallpdliagahqnadpvvldvswislwfafnrsfepthrnemleiapliesvyase
lsvmkvdmrhlslmqrrfpdvliqarpshfwkavlndspeavkavmnlshshnfinirdm
mrwvllpslqpslklvleeeawaaandfedlmltdqvymhrdmlpeprlddierfrqegf
yytnmleappeidrvvqytyeiarlqanmgqfraalrrimddddwvrfggvlrtvrvkff
darppddilqglpfsydtikyatettifyliynvefsntpdslvlinptytmtkvfinkr
ivervrvgqilavlnrrfvaykgkmrimditqslkmgtklaaptv

Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)

>2btvC (C:)
mdtiaaraltvmracatlqearivleanvmeilgiainryngltlrgvtmrptslaqrne
mffmcldmmlsaaginvgpispdytqhmatigvlatpeipftteaaneiarvtgetstwg
parqpygffleteetfqpgrwfmraaqaatavvcgpdmiqvslnagargdvqqifqgrnd
pmmiylvwrrienfamaqgnsqqtqagvtvsvggvdmragriiawdgqaalhvrnptqqn
amvqiqvvfyismdktlnqypaltaeifnvysfrdhtwhglrtairnrttlpnmlppifp
pndrdsiltllllstladvytvlrpefamhgvnpmpgpltaaiaraayv

Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)

>2btvD (D:)
mdtiaaraltvmracatlqearivleanvmeilgiainryngltlrgvtmrptslaqrne
mffmcldmmlsaaginvgpispdytqhmatigvlatpeipftteaaneiarvtgetstwg
parqpygffleteetfqpgrwfmraaqaatavvcgpdmiqvslnagargdvqqifqgrnd
pmmiylvwrrienfamaqgnsqqtqagvtvsvggvdmragriiawdgqaalhvrnptqqn
amvqiqvvfyismdktlnqypaltaeifnvysfrdhtwhglrtairnrttlpnmlppifp
pndrdsiltllllstladvytvlrpefamhgvnpmpgpltaaiaraayv

Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)

>2btvE (E:)
mdtiaaraltvmracatlqearivleanvmeilgiainryngltlrgvtmrptslaqrne
mffmcldmmlsaaginvgpispdytqhmatigvlatpeipftteaaneiarvtgetstwg
parqpygffleteetfqpgrwfmraaqaatavvcgpdmiqvslnagargdvqqifqgrnd
pmmiylvwrrienfamaqgnsqqtqagvtvsvggvdmragriiawdgqaalhvrnptqqn
amvqiqvvfyismdktlnqypaltaeifnvysfrdhtwhglrtairnrttlpnmlppifp
pndrdsiltllllstladvytvlrpefamhgvnpmpgpltaaiaraayv

Chain 'F':
Sequence; same for both SEQRES and ATOM records: (download)

>2btvF (F:)
mdtiaaraltvmracatlqearivleanvmeilgiainryngltlrgvtmrptslaqrne
mffmcldmmlsaaginvgpispdytqhmatigvlatpeipftteaaneiarvtgetstwg
parqpygffleteetfqpgrwfmraaqaatavvcgpdmiqvslnagargdvqqifqgrnd
pmmiylvwrrienfamaqgnsqqtqagvtvsvggvdmragriiawdgqaalhvrnptqqn
amvqiqvvfyismdktlnqypaltaeifnvysfrdhtwhglrtairnrttlpnmlppifp
pndrdsiltllllstladvytvlrpefamhgvnpmpgpltaaiaraayv

Chain 'G':
Sequence; same for both SEQRES and ATOM records: (download)

>2btvG (G:)
mdtiaaraltvmracatlqearivleanvmeilgiainryngltlrgvtmrptslaqrne
mffmcldmmlsaaginvgpispdytqhmatigvlatpeipftteaaneiarvtgetstwg
parqpygffleteetfqpgrwfmraaqaatavvcgpdmiqvslnagargdvqqifqgrnd
pmmiylvwrrienfamaqgnsqqtqagvtvsvggvdmragriiawdgqaalhvrnptqqn
amvqiqvvfyismdktlnqypaltaeifnvysfrdhtwhglrtairnrttlpnmlppifp
pndrdsiltllllstladvytvlrpefamhgvnpmpgpltaaiaraayv

Chain 'H':
Sequence; same for both SEQRES and ATOM records: (download)

>2btvH (H:)
mdtiaaraltvmracatlqearivleanvmeilgiainryngltlrgvtmrptslaqrne
mffmcldmmlsaaginvgpispdytqhmatigvlatpeipftteaaneiarvtgetstwg
parqpygffleteetfqpgrwfmraaqaatavvcgpdmiqvslnagargdvqqifqgrnd
pmmiylvwrrienfamaqgnsqqtqagvtvsvggvdmragriiawdgqaalhvrnptqqn
amvqiqvvfyismdktlnqypaltaeifnvysfrdhtwhglrtairnrttlpnmlppifp
pndrdsiltllllstladvytvlrpefamhgvnpmpgpltaaiaraayv

Chain 'I':
Sequence; same for both SEQRES and ATOM records: (download)

>2btvI (I:)
mdtiaaraltvmracatlqearivleanvmeilgiainryngltlrgvtmrptslaqrne
mffmcldmmlsaaginvgpispdytqhmatigvlatpeipftteaaneiarvtgetstwg
parqpygffleteetfqpgrwfmraaqaatavvcgpdmiqvslnagargdvqqifqgrnd
pmmiylvwrrienfamaqgnsqqtqagvtvsvggvdmragriiawdgqaalhvrnptqqn
amvqiqvvfyismdktlnqypaltaeifnvysfrdhtwhglrtairnrttlpnmlppifp
pndrdsiltllllstladvytvlrpefamhgvnpmpgpltaaiaraayv

Chain 'J':
Sequence; same for both SEQRES and ATOM records: (download)

>2btvJ (J:)
mdtiaaraltvmracatlqearivleanvmeilgiainryngltlrgvtmrptslaqrne
mffmcldmmlsaaginvgpispdytqhmatigvlatpeipftteaaneiarvtgetstwg
parqpygffleteetfqpgrwfmraaqaatavvcgpdmiqvslnagargdvqqifqgrnd
pmmiylvwrrienfamaqgnsqqtqagvtvsvggvdmragriiawdgqaalhvrnptqqn
amvqiqvvfyismdktlnqypaltaeifnvysfrdhtwhglrtairnrttlpnmlppifp
pndrdsiltllllstladvytvlrpefamhgvnpmpgpltaaiaraayv

Chain 'P':
Sequence; same for both SEQRES and ATOM records: (download)

>2btvP (P:)
mdtiaaraltvmracatlqearivleanvmeilgiainryngltlrgvtmrptslaqrne
mffmcldmmlsaaginvgpispdytqhmatigvlatpeipftteaaneiarvtgetstwg
parqpygffleteetfqpgrwfmraaqaatavvcgpdmiqvslnagargdvqqifqgrnd
pmmiylvwrrienfamaqgnsqqtqagvtvsvggvdmragriiawdgqaalhvrnptqqn
amvqiqvvfyismdktlnqypaltaeifnvysfrdhtwhglrtairnrttlpnmlppifp
pndrdsiltllllstladvytvlrpefamhgvnpmpgpltaaiaraayv

Chain 'Q':
Sequence; same for both SEQRES and ATOM records: (download)

>2btvQ (Q:)
mdtiaaraltvmracatlqearivleanvmeilgiainryngltlrgvtmrptslaqrne
mffmcldmmlsaaginvgpispdytqhmatigvlatpeipftteaaneiarvtgetstwg
parqpygffleteetfqpgrwfmraaqaatavvcgpdmiqvslnagargdvqqifqgrnd
pmmiylvwrrienfamaqgnsqqtqagvtvsvggvdmragriiawdgqaalhvrnptqqn
amvqiqvvfyismdktlnqypaltaeifnvysfrdhtwhglrtairnrttlpnmlppifp
pndrdsiltllllstladvytvlrpefamhgvnpmpgpltaaiaraayv

Chain 'R':
Sequence; same for both SEQRES and ATOM records: (download)

>2btvR (R:)
mdtiaaraltvmracatlqearivleanvmeilgiainryngltlrgvtmrptslaqrne
mffmcldmmlsaaginvgpispdytqhmatigvlatpeipftteaaneiarvtgetstwg
parqpygffleteetfqpgrwfmraaqaatavvcgpdmiqvslnagargdvqqifqgrnd
pmmiylvwrrienfamaqgnsqqtqagvtvsvggvdmragriiawdgqaalhvrnptqqn
amvqiqvvfyismdktlnqypaltaeifnvysfrdhtwhglrtairnrttlpnmlppifp
pndrdsiltllllstladvytvlrpefamhgvnpmpgpltaaiaraayv

Chain 'S':
Sequence; same for both SEQRES and ATOM records: (download)

>2btvS (S:)
mdtiaaraltvmracatlqearivleanvmeilgiainryngltlrgvtmrptslaqrne
mffmcldmmlsaaginvgpispdytqhmatigvlatpeipftteaaneiarvtgetstwg
parqpygffleteetfqpgrwfmraaqaatavvcgpdmiqvslnagargdvqqifqgrnd
pmmiylvwrrienfamaqgnsqqtqagvtvsvggvdmragriiawdgqaalhvrnptqqn
amvqiqvvfyismdktlnqypaltaeifnvysfrdhtwhglrtairnrttlpnmlppifp
pndrdsiltllllstladvytvlrpefamhgvnpmpgpltaaiaraayv

Chain 'T':
Sequence; same for both SEQRES and ATOM records: (download)

>2btvT (T:)
mdtiaaraltvmracatlqearivleanvmeilgiainryngltlrgvtmrptslaqrne
mffmcldmmlsaaginvgpispdytqhmatigvlatpeipftteaaneiarvtgetstwg
parqpygffleteetfqpgrwfmraaqaatavvcgpdmiqvslnagargdvqqifqgrnd
pmmiylvwrrienfamaqgnsqqtqagvtvsvggvdmragriiawdgqaalhvrnptqqn
amvqiqvvfyismdktlnqypaltaeifnvysfrdhtwhglrtairnrttlpnmlppifp
pndrdsiltllllstladvytvlrpefamhgvnpmpgpltaaiaraayv