PDB entry 2bsq

View 2bsq on RCSB PDB site
Description: fitab bound to DNA
Class: transcription regulation complex
Keywords: pin domain, ribbon-helix-helix, DNA binding, heterodimer, transcription regulation complex
Deposited on 2005-05-23, released 2006-08-24
The last revision prior to the SCOP 1.75 freeze date was dated 2006-12-06, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 3 Å
R-factor: 0.213
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: trafficking protein b
    Species: Neisseria gonorrhoeae
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5F882 (0-138)
      • engineered mutation (138)
    Domains in SCOP 1.75: d2bsqa1
  • Chain 'B':
    Compound: trafficking protein b
    Species: Neisseria gonorrhoeae
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5F882 (0-138)
      • engineered mutation (138)
    Domains in SCOP 1.75: d2bsqb1
  • Chain 'C':
    Compound: trafficking protein b
    Species: Neisseria gonorrhoeae
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5F882 (0-138)
      • engineered mutation (138)
    Domains in SCOP 1.75: d2bsqc1
  • Chain 'D':
    Compound: trafficking protein b
    Species: Neisseria gonorrhoeae
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5F882 (0-138)
      • engineered mutation (138)
    Domains in SCOP 1.75: d2bsqd1
  • Chain 'E':
    Compound: trafficking protein a
    Species: Neisseria gonorrhoeae
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2bsqe1
  • Chain 'F':
    Compound: trafficking protein a
    Species: Neisseria gonorrhoeae
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2bsqf1
  • Chain 'G':
    Compound: trafficking protein a
    Species: Neisseria gonorrhoeae
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2bsqg1
  • Chain 'H':
    Compound: trafficking protein a
    Species: Neisseria gonorrhoeae
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2bsqh1
  • Chain 'I':
    Compound: ir36, forward strand
  • Chain 'J':
    Compound: ir36, reverse strand
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2bsqA (A:)
milldtnviseplrpqpnervvawldsliledvylsaitvaemrlgvalllngkkknvlh
ermeqsilplfagrilpfdepvaaiyaqirsyakthgkeiaaadgyiaatakqhsmtvat
rdtgsffaadvavfnpwhlehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2bsqA (A:)
milldtnviseplrpqpnervvawldsliledvylsaitvaemrlgvalllngkkknvlh
ermeqsilplfagrilpfdepvaaiyaqirsyakthgkeiaaadgyiaatakqhsmtvat
rdtgsffaadvavfnpwhlehhhh

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2bsqB (B:)
milldtnviseplrpqpnervvawldsliledvylsaitvaemrlgvalllngkkknvlh
ermeqsilplfagrilpfdepvaaiyaqirsyakthgkeiaaadgyiaatakqhsmtvat
rdtgsffaadvavfnpwhlehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2bsqB (B:)
milldtnviseplrpqpnervvawldsliledvylsaitvaemrlgvalllngkkknvlh
ermeqsilplfagrilpfdepvaaiyaqirsyakthgkeiaaadgyiaatakqhsmtvat
rdtgsffaadvavfnpwhleh

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2bsqC (C:)
milldtnviseplrpqpnervvawldsliledvylsaitvaemrlgvalllngkkknvlh
ermeqsilplfagrilpfdepvaaiyaqirsyakthgkeiaaadgyiaatakqhsmtvat
rdtgsffaadvavfnpwhlehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2bsqC (C:)
milldtnviseplrpqpnervvawldsliledvylsaitvaemrlgvalllngkkknvlh
ermeqsilplfagrilpfdepvaaiyaqirsyakthgkeiaaadgyiaatakqhsmtvat
rdtgsffaadvavfnpwhlehhhh

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2bsqD (D:)
milldtnviseplrpqpnervvawldsliledvylsaitvaemrlgvalllngkkknvlh
ermeqsilplfagrilpfdepvaaiyaqirsyakthgkeiaaadgyiaatakqhsmtvat
rdtgsffaadvavfnpwhlehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2bsqD (D:)
milldtnviseplrpqpnervvawldsliledvylsaitvaemrlgvalllngkkknvlh
ermeqsilplfagrilpfdepvaaiyaqirsyakthgkeiaaadgyiaatakqhsmtvat
rdtgsffaadvavfnpwhleh

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >2bsqE (E:)
asvvirnlseathnaikfraraagrsteaeirlildniakaqqtvrlgsmlasigqeigg
veledvrgrntdnevsl

    Sequence, based on observed residues (ATOM records): (download) 
    >2bsqE (E:)
asvvirnlseathnaikfraraagrsteaeirlildniakaqqtvrlgsmlasigqeigg
veledvrgr

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >2bsqF (F:)
asvvirnlseathnaikfraraagrsteaeirlildniakaqqtvrlgsmlasigqeigg
veledvrgrntdnevsl

    Sequence, based on observed residues (ATOM records): (download) 
    >2bsqF (F:)
asvvirnlseathnaikfraraagrsteaeirlildniakaqqtvrlgsmlasigqeigg
veled

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >2bsqG (G:)
asvvirnlseathnaikfraraagrsteaeirlildniakaqqtvrlgsmlasigqeigg
veledvrgrntdnevsl

    Sequence, based on observed residues (ATOM records): (download) 
    >2bsqG (G:)
asvvirnlseathnaikfraraagrsteaeirlildniakaqqtvrlgsmlasigqeigg
veledvrg

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >2bsqH (H:)
asvvirnlseathnaikfraraagrsteaeirlildniakaqqtvrlgsmlasigqeigg
veledvrgrntdnevsl

    Sequence, based on observed residues (ATOM records): (download) 
    >2bsqH (H:)
asvvirnlseathnaikfraraagrsteaeirlildniakaqqtvrlgsmlasigqeigg
vele

  • Chain 'I':
    No sequence available.

  • Chain 'J':
    No sequence available.