PDB entry 2brr
View 2brr on RCSB PDB site
Description: Complex of the neisserial PorA P1.4 epitope peptide and two Fab- fragments (antibody MN20B9.34)
Class: immune system
Keywords: immune system, fab fragment, anti-pora antibody, p1.4 antibody, antigen, porin, transmembrane, antibody-antigen complex
Deposited on
2005-05-11, released
2005-07-27
The last revision prior to the SCOPe 2.08 freeze date was dated
2012-05-16, with a file datestamp of
2012-05-11.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: 0.2
AEROSPACI score: 0.45
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'H':
Compound: mn20b9.34 anti-p1.4 antibody, fab heavy chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2brrh1 - Chain 'L':
Compound: mn20b9.34 anti-p1.4 antibody, fab light chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2brrl1, d2brrl2 - Chain 'P':
Compound: class 1 outer membrane protein variable region 2
Species: NEISSERIA MENINGITIDIS, synthetic [TaxId:487]
Database cross-references and differences (RAF-indexed):
- PDB 2BRR
- Uniprot Q51183 (Start-10)
- Chain 'X':
Compound: mn20b9.34 anti-p1.4 antibody, fab light chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2brrx1, d2brrx2 - Chain 'Y':
Compound: mn20b9.34 anti-p1.4 antibody, fab heavy chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2brry1 - Heterogens: SO4, ACY, HOH
PDB Chain Sequences:
- Chain 'H':
Sequence, based on SEQRES records: (download)
>2brrH (H:)
avqleqsgpelkkpgetvkisckasgytftnygmnwvkqapgkglkwmgwintytgepty
addfkerfafsletsasaaylqinnlknedtatyfcardyygstypyyamdywgqgttvt
vssakttapsvyplapvcgdttgssvtlgclvkgyfpepvtltwnsgslssgvhtfpavl
qsdlytlsssvtvtsstwpsqsitcnvahpasstkvdkkieprgg
Sequence, based on observed residues (ATOM records): (download)
>2brrH (H:)
vqleqsgpelkkpgetvkisckasgytftnygmnwvkqapgkglkwmgwintytgeptya
ddfkerfafsletsasaaylqinnlknedtatyfcardyygstypyyamdywgqgttvtv
ssakttapsvyplapvcgdttgssvtlgclvkgyfpepvtltwnsgslssgvhtfpavlq
sdlytlsssvtvtsstwpsqsitcnvahpasstkvdkkieprgg
- Chain 'L':
Sequence; same for both SEQRES and ATOM records: (download)
>2brrL (L:)
envltqspaimsaspgekvtmtcrasssvsssylhwyqqksgaspklwiystsnlasgvp
arfsgsgsgtsysltissveaedaatyycqqysgypytfgggtkleikradaaptvsifp
psseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstl
tltkdeyerhnsytceathktstspivksfnrnec
- Chain 'P':
No sequence available.
- Chain 'X':
Sequence, based on SEQRES records: (download)
>2brrX (X:)
envltqspaimsaspgekvtmtcrasssvsssylhwyqqksgaspklwiystsnlasgvp
arfsgsgsgtsysltissveaedaatyycqqysgypytfgggtkleikradaaptvsifp
psseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstl
tltkdeyerhnsytceathktstspivksfnrnec
Sequence, based on observed residues (ATOM records): (download)
>2brrX (X:)
nvltqspaimsaspgekvtmtcrasssvsssylhwyqqksgaspklwiystsnlasgvpa
rfsgsgsgtsysltissveaedaatyycqqysgypytfgggtkleikradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
ltkdeyerhnsytceathktstspivksfnrnec
- Chain 'Y':
Sequence; same for both SEQRES and ATOM records: (download)
>2brrY (Y:)
avqleqsgpelkkpgetvkisckasgytftnygmnwvkqapgkglkwmgwintytgepty
addfkerfafsletsasaaylqinnlknedtatyfcardyygstypyyamdywgqgttvt
vssakttapsvyplapvcgdttgssvtlgclvkgyfpepvtltwnsgslssgvhtfpavl
qsdlytlsssvtvtsstwpsqsitcnvahpasstkvdkkieprgg