PDB entry 2bme

View 2bme on RCSB PDB site
Description: high resolution structure of gppnhp-bound human rab4a
Class: protein transport
Keywords: GTP-binding protein, vesicular transport, endocytosis, prenylation, protein transport, transport
Deposited on 2005-03-13, released 2005-04-25
The last revision prior to the SCOPe 2.03 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.57 Å
R-factor: 0.194
AEROSPACI score: 0.59 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ras-related protein rab4a
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d2bmea_
  • Chain 'B':
    Compound: ras-related protein rab4a
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d2bmeb_
  • Chain 'C':
    Compound: ras-related protein rab4a
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d2bmec_
  • Chain 'D':
    Compound: ras-related protein rab4a
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d2bmed_
  • Heterogens: GNP, TRS, BME, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2bmeA (A:)
ghmsetydflfkflvignagtgkscllhqfiekkfkddsnhtigvefgskiinvggkyvk
lqiwdtagqerfrsvtrsyyrgaagallvyditsretynaltnwltdarmlasqniviil
cgnkkdldadrevtfleasrfaqenelmfletsaltgenveeafvqcarkilnkiesgel
dpermg

    Sequence, based on observed residues (ATOM records): (download) 
    >2bmeA (A:)
setydflfkflvignagtgkscllhqfiekkfkddsnhtigvefgskiinvggkyvklqi
wdtagqerfrsvtrsyyrgaagallvyditsretynaltnwltdarmlasqniviilcgn
kkdldadrevtfleasrfaqenelmfletsaltgenveeafvqcarkilnkiesge

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2bmeB (B:)
ghmsetydflfkflvignagtgkscllhqfiekkfkddsnhtigvefgskiinvggkyvk
lqiwdtagqerfrsvtrsyyrgaagallvyditsretynaltnwltdarmlasqniviil
cgnkkdldadrevtfleasrfaqenelmfletsaltgenveeafvqcarkilnkiesgel
dpermg

    Sequence, based on observed residues (ATOM records): (download) 
    >2bmeB (B:)
etydflfkflvignagtgkscllhqfiekkfkddsnhtigvefgskiinvggkyvklqiw
dtagqerfrsvtrsyyrgaagallvyditsretynaltnwltdarmlasqniviilcgnk
kdldadrevtfleasrfaqenelmfletsaltgenveeafvqcarkilnkies

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2bmeC (C:)
ghmsetydflfkflvignagtgkscllhqfiekkfkddsnhtigvefgskiinvggkyvk
lqiwdtagqerfrsvtrsyyrgaagallvyditsretynaltnwltdarmlasqniviil
cgnkkdldadrevtfleasrfaqenelmfletsaltgenveeafvqcarkilnkiesgel
dpermg

    Sequence, based on observed residues (ATOM records): (download) 
    >2bmeC (C:)
setydflfkflvignagtgkscllhqfiekkfkddsnhtigvefgskiinvggkyvklqi
wdtagqerfrsvtrsyyrgaagallvyditsretynaltnwltdarmlasqniviilcgn
kkdldadrevtfleasrfaqenelmfletsaltgenveeafvqcarkilnkies

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2bmeD (D:)
ghmsetydflfkflvignagtgkscllhqfiekkfkddsnhtigvefgskiinvggkyvk
lqiwdtagqerfrsvtrsyyrgaagallvyditsretynaltnwltdarmlasqniviil
cgnkkdldadrevtfleasrfaqenelmfletsaltgenveeafvqcarkilnkiesgel
dpermg

    Sequence, based on observed residues (ATOM records): (download) 
    >2bmeD (D:)
setydflfkflvignagtgkscllhqfiekkfkddsnhtigvefgskiinvggkyvklqi
wdtagqerfrsvtrsyyrgaagallvyditsretynaltnwltdarmlasqniviilcgn
kkdldadrevtfleasrfaqenelmfletsaltgenveeafvqcarkilnkies