PDB entry 2bmd
View 2bmd on RCSB PDB site
Description: high resolution structure of GDP-bound human rab4a
Class: protein transport
Keywords: GTP-binding protein, vesicular transport, endocytosis, prenylation, protein transport, transport
Deposited on
2005-03-13, released
2005-04-25
The last revision prior to the SCOPe 2.01 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.162
AEROSPACI score: 0.54
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: ras-related protein rab4a
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- PDB 2BMD
- Uniprot P20338 (Start-185)
Domains in SCOPe 2.01: d2bmda1 - Heterogens: GDP, GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2bmdA (A:)
ghmsetydflfkflvignagtgkscllhqfiekkfkddsnhtigvefgskiinvggkyvk
lqiwdtagqerfrsvtrsyyrgaagallvyditsretynaltnwltdarmlasqniviil
cgnkkdldadrevtfleasrfaqenelmfletsaltgenveeafvqcarkilnkiesgel
dpermg
Sequence, based on observed residues (ATOM records): (download)
>2bmdA (A:)
etydflfkflvignagtgkscllhqfiekkfkefgskiinvggkyvklqiwdtagqerfr
svtrsyyrgaagallvyditsretynaltnwltdarmlasqniviilcgnkkdldadrev
tfleasrfaqenelmfletsaltgenveeafvqcarkilnkiesgeldpermg