PDB entry 2bm9

View 2bm9 on RCSB PDB site
Description: cmci-n160 in complex with sam
Class: porin
Keywords: cephamycin biosynthesis, porin
Deposited on 2005-03-10, released 2006-03-09
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-31.
Experiment type: XRAY
Resolution: 2.94 Å
R-factor: 0.267
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: cephalosporin hydroxylase cmci
    Species: Streptomyces clavuligerus [TaxId:1901]
    Database cross-references and differences (RAF-indexed):
    • Uniprot O85726
      • engineered mutation (9)
      • engineered mutation (159)
      • engineered mutation (199)
    Domains in SCOPe 2.08: d2bm9a_
  • Chain 'B':
    Compound: cephalosporin hydroxylase cmci
    Species: Streptomyces clavuligerus [TaxId:1901]
    Database cross-references and differences (RAF-indexed):
    • Uniprot O85726
      • engineered mutation (9)
      • engineered mutation (159)
      • engineered mutation (199)
    Domains in SCOPe 2.08: d2bm9b_
  • Chain 'C':
    Compound: cephalosporin hydroxylase cmci
    Species: Streptomyces clavuligerus [TaxId:1901]
    Database cross-references and differences (RAF-indexed):
    • Uniprot O85726
      • engineered mutation (9)
      • engineered mutation (159)
      • engineered mutation (199)
    Domains in SCOPe 2.08: d2bm9c_
  • Chain 'D':
    Compound: cephalosporin hydroxylase cmci
    Species: Streptomyces clavuligerus [TaxId:1901]
    Database cross-references and differences (RAF-indexed):
    • Uniprot O85726
      • engineered mutation (9)
      • engineered mutation (159)
      • engineered mutation (199)
    Domains in SCOPe 2.08: d2bm9d_
  • Chain 'E':
    Compound: cephalosporin hydroxylase cmci
    Species: Streptomyces clavuligerus [TaxId:1901]
    Database cross-references and differences (RAF-indexed):
    • Uniprot O85726
      • engineered mutation (9)
      • engineered mutation (159)
      • engineered mutation (199)
    Domains in SCOPe 2.08: d2bm9e_
  • Chain 'F':
    Compound: cephalosporin hydroxylase cmci
    Species: Streptomyces clavuligerus [TaxId:1901]
    Database cross-references and differences (RAF-indexed):
    • Uniprot O85726
      • engineered mutation (9)
      • engineered mutation (159)
      • engineered mutation (199)
    Domains in SCOPe 2.08: d2bm9f_
  • Heterogens: SAM, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >2bm9A (A:)
    mndysrqnfqdlnlfrglgedpayhppvltdrprdwpldrwaeaprdlgysdfspyqwrg
    lrmlkdpdtqavyhdmlwelrprtivelgvynggslawfrdltkimgidcqvigidrdls
    rcqipasdmenitlhqgdcsdlttfehlremahplifidnahantfnimkwavdhlleeg
    dyfiiedmipywyryapqlfseylgafrdvlsmdmlyanassqldrgvlrrvaakq
    

    Sequence, based on observed residues (ATOM records): (download)
    >2bm9A (A:)
    ndysrqnfqdlnlfrglgedpayhppvltdrprdwpldrwaeaprdlgysdfspyqwrgl
    rmlkdpdtqavyhdmlwelrprtivelgvynggslawfrdltkimgidcqvigidrdlsr
    cqipasdmenitlhqgdcsdlttfehlremahplifidnahantfnimkwavdhlleegd
    yfiiedmipywyryapqlfseylgafrdvlsmdmlyanassqldrgvlrrva
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >2bm9B (B:)
    mndysrqnfqdlnlfrglgedpayhppvltdrprdwpldrwaeaprdlgysdfspyqwrg
    lrmlkdpdtqavyhdmlwelrprtivelgvynggslawfrdltkimgidcqvigidrdls
    rcqipasdmenitlhqgdcsdlttfehlremahplifidnahantfnimkwavdhlleeg
    dyfiiedmipywyryapqlfseylgafrdvlsmdmlyanassqldrgvlrrvaakq
    

    Sequence, based on observed residues (ATOM records): (download)
    >2bm9B (B:)
    ysrqnfqdlnlfrglgedpayhppvltdrprdwpldrwaeaprdlgysdfspyqwrglrm
    lkdpdtqavyhdmlwelrprtivelgvynggslawfrdltkimgidcqvigidrdlsrcq
    ipasdmenitlhqgdcsdlttfehlremahplifidnahantfnimkwavdhlleegdyf
    iiedmipywyryapqlfseylgafrdvlsmdmlyanassqldrgvlrrvaa
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >2bm9C (C:)
    mndysrqnfqdlnlfrglgedpayhppvltdrprdwpldrwaeaprdlgysdfspyqwrg
    lrmlkdpdtqavyhdmlwelrprtivelgvynggslawfrdltkimgidcqvigidrdls
    rcqipasdmenitlhqgdcsdlttfehlremahplifidnahantfnimkwavdhlleeg
    dyfiiedmipywyryapqlfseylgafrdvlsmdmlyanassqldrgvlrrvaakq
    

    Sequence, based on observed residues (ATOM records): (download)
    >2bm9C (C:)
    dysrqnfqdlnlfrglgedpayhppvltdrprdwpldrwaeaprdlgysdfspyqwrglr
    mlkdpdtqavyhdmlwelrprtivelgvynggslawfrdltkimgidcqvigidrdlsrc
    qipasdmenitlhqgdcsdlttfehlremahplifidnahantfnimkwavdhlleegdy
    fiiedmipywyryapqlfseylgafrdvlsmdmlyanassqldrgvlrrva
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >2bm9D (D:)
    mndysrqnfqdlnlfrglgedpayhppvltdrprdwpldrwaeaprdlgysdfspyqwrg
    lrmlkdpdtqavyhdmlwelrprtivelgvynggslawfrdltkimgidcqvigidrdls
    rcqipasdmenitlhqgdcsdlttfehlremahplifidnahantfnimkwavdhlleeg
    dyfiiedmipywyryapqlfseylgafrdvlsmdmlyanassqldrgvlrrvaakq
    

    Sequence, based on observed residues (ATOM records): (download)
    >2bm9D (D:)
    ndysrqnfqdlnlfrglgedpayhppvltdrprdwpldrwaeaprdlgysdfspyqwrgl
    rmlkdpdtqavyhdmlwelrprtivelgvynggslawfrdltkimgidcqvigidrdlsr
    cqipasdmenitlhqgdcsdlttfehlremahplifidnahantfnimkwavdhlleegd
    yfiiedmipywyryapqlfseylgafrdvlsmdmlyanassqldrgvlrrva
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >2bm9E (E:)
    mndysrqnfqdlnlfrglgedpayhppvltdrprdwpldrwaeaprdlgysdfspyqwrg
    lrmlkdpdtqavyhdmlwelrprtivelgvynggslawfrdltkimgidcqvigidrdls
    rcqipasdmenitlhqgdcsdlttfehlremahplifidnahantfnimkwavdhlleeg
    dyfiiedmipywyryapqlfseylgafrdvlsmdmlyanassqldrgvlrrvaakq
    

    Sequence, based on observed residues (ATOM records): (download)
    >2bm9E (E:)
    dysrqnfqdlnlfrglgedpayhppvltdrprdwpldrwaeaprdlgysdfspyqwrglr
    mlkdpdtqavyhdmlwelrprtivelgvynggslawfrdltkimgidcqvigidrdlsrc
    qipasdmenitlhqgdcsdlttfehlremahplifidnahantfnimkwavdhlleegdy
    fiiedmipywyryapqlfseylgafrdvlsmdmlyanassqldrgvlrrva
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >2bm9F (F:)
    mndysrqnfqdlnlfrglgedpayhppvltdrprdwpldrwaeaprdlgysdfspyqwrg
    lrmlkdpdtqavyhdmlwelrprtivelgvynggslawfrdltkimgidcqvigidrdls
    rcqipasdmenitlhqgdcsdlttfehlremahplifidnahantfnimkwavdhlleeg
    dyfiiedmipywyryapqlfseylgafrdvlsmdmlyanassqldrgvlrrvaakq
    

    Sequence, based on observed residues (ATOM records): (download)
    >2bm9F (F:)
    dysrqnfqdlnlfrglgedpayhppvltdrprdwpldrwaeaprdlgysdfspyqwrglr
    mlkdpdtqavyhdmlwelrprtivelgvynggslawfrdltkimgidcqvigidrdlsrc
    qipasdmenitlhqgdcsdlttfehlremahplifidnahantfnimkwavdhlleegdy
    fiiedmipywyryapqlfseylgafrdvlsmdmlyanassqldrgvlrrvaa