PDB entry 2bk6

View 2bk6 on RCSB PDB site
Description: the x-ray crystal structure of the listeria innocua h31g dps mutant.
Class: iron oxidation and storage
Keywords: dps (DNA binding protein from starved cells), ferroxidase center, mutagenesis study, iron oxidation and storage, metal transport
Deposited on 2005-02-11, released 2005-02-14
The last revision prior to the SCOP 1.73 freeze date was dated 2005-04-20, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.19 Å
R-factor: 0.21188
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: non-heme iron-containing ferritin
    Species: Listeria innocua
    Database cross-references and differences (RAF-indexed):
    • Uniprot P80725 (Start-155)
      • engineered mutation (30)
    Domains in SCOP 1.73: d2bk6a1
  • Chain 'B':
    Compound: non-heme iron-containing ferritin
    Species: Listeria innocua
    Database cross-references and differences (RAF-indexed):
    • Uniprot P80725 (Start-155)
      • engineered mutation (30)
    Domains in SCOP 1.73: d2bk6b1
  • Chain 'C':
    Compound: non-heme iron-containing ferritin
    Species: Listeria innocua
    Database cross-references and differences (RAF-indexed):
    • Uniprot P80725 (Start-155)
      • engineered mutation (30)
    Domains in SCOP 1.73: d2bk6c1
  • Chain 'D':
    Compound: non-heme iron-containing ferritin
    Species: Listeria innocua
    Database cross-references and differences (RAF-indexed):
    • Uniprot P80725 (Start-155)
      • engineered mutation (30)
    Domains in SCOP 1.73: d2bk6d1
  • Chain 'E':
    Compound: non-heme iron-containing ferritin
    Species: Listeria innocua
    Database cross-references and differences (RAF-indexed):
    • Uniprot P80725 (Start-155)
      • engineered mutation (30)
    Domains in SCOP 1.73: d2bk6e1
  • Chain 'F':
    Compound: non-heme iron-containing ferritin
    Species: Listeria innocua
    Database cross-references and differences (RAF-indexed):
    • Uniprot P80725 (Start-155)
      • engineered mutation (30)
    Domains in SCOP 1.73: d2bk6f1
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2bk6A (A:)
mktinsvdtkeflnhqvanlnvftvkihqigwymrghnfftlhekmddlysefgeqmdev
aerllaiggspfstlkeflenasveeapytkpktmdqlmedlvgtlellrdeykqgielt
dkegddvtndmliafkasidkhiwmfkaflgkaple

    Sequence, based on observed residues (ATOM records): (download) 
    >2bk6A (A:)
vdtkeflnhqvanlnvftvkihqigwymrghnfftlhekmddlysefgeqmdevaerlla
iggspfstlkeflenasveeapytkpktmdqlmedlvgtlellrdeykqgieltdkegdd
vtndmliafkasidkhiwmfkaflgkaple

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2bk6B (B:)
mktinsvdtkeflnhqvanlnvftvkihqigwymrghnfftlhekmddlysefgeqmdev
aerllaiggspfstlkeflenasveeapytkpktmdqlmedlvgtlellrdeykqgielt
dkegddvtndmliafkasidkhiwmfkaflgkaple

    Sequence, based on observed residues (ATOM records): (download) 
    >2bk6B (B:)
vdtkeflnhqvanlnvftvkihqigwymrghnfftlhekmddlysefgeqmdevaerlla
iggspfstlkeflenasveeapytkpktmdqlmedlvgtlellrdeykqgieltdkegdd
vtndmliafkasidkhiwmfkaflgkaple

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2bk6C (C:)
mktinsvdtkeflnhqvanlnvftvkihqigwymrghnfftlhekmddlysefgeqmdev
aerllaiggspfstlkeflenasveeapytkpktmdqlmedlvgtlellrdeykqgielt
dkegddvtndmliafkasidkhiwmfkaflgkaple

    Sequence, based on observed residues (ATOM records): (download) 
    >2bk6C (C:)
tinsvdtkeflnhqvanlnvftvkihqigwymrghnfftlhekmddlysefgeqmdevae
rllaiggspfstlkeflenasveeapytkpktmdqlmedlvgtlellrdeykqgieltdk
egddvtndmliafkasidkhiwmfkaflgkaple

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2bk6D (D:)
mktinsvdtkeflnhqvanlnvftvkihqigwymrghnfftlhekmddlysefgeqmdev
aerllaiggspfstlkeflenasveeapytkpktmdqlmedlvgtlellrdeykqgielt
dkegddvtndmliafkasidkhiwmfkaflgkaple

    Sequence, based on observed residues (ATOM records): (download) 
    >2bk6D (D:)
vdtkeflnhqvanlnvftvkihqigwymrghnfftlhekmddlysefgeqmdevaerlla
iggspfstlkeflenasveeapytkpktmdqlmedlvgtlellrdeykqgieltdkegdd
vtndmliafkasidkhiwmfkaflgkaple

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >2bk6E (E:)
mktinsvdtkeflnhqvanlnvftvkihqigwymrghnfftlhekmddlysefgeqmdev
aerllaiggspfstlkeflenasveeapytkpktmdqlmedlvgtlellrdeykqgielt
dkegddvtndmliafkasidkhiwmfkaflgkaple

    Sequence, based on observed residues (ATOM records): (download) 
    >2bk6E (E:)
vdtkeflnhqvanlnvftvkihqigwymrghnfftlhekmddlysefgeqmdevaerlla
iggspfstlkeflenasveeapytkpktmdqlmedlvgtlellrdeykqgieltdkegdd
vtndmliafkasidkhiwmfkaflgkaple

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >2bk6F (F:)
mktinsvdtkeflnhqvanlnvftvkihqigwymrghnfftlhekmddlysefgeqmdev
aerllaiggspfstlkeflenasveeapytkpktmdqlmedlvgtlellrdeykqgielt
dkegddvtndmliafkasidkhiwmfkaflgkaple

    Sequence, based on observed residues (ATOM records): (download) 
    >2bk6F (F:)
vdtkeflnhqvanlnvftvkihqigwymrghnfftlhekmddlysefgeqmdevaerlla
iggspfstlkeflenasveeapytkpktmdqlmedlvgtlellrdeykqgieltdkegdd
vtndmliafkasidkhiwmfkaflgkaple