PDB entry 2bj3

View 2bj3 on RCSB PDB site
Description: nikr-apo
Class: transcription
Keywords: transcription, repressor, pyrococcus horikoshii, nikr, riken structural genomics/proteomics initiative, rsgi, structural genomics
Deposited on 2005-01-28, released 2005-04-08
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.218
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: nickel responsive regulator
    Species: Pyrococcus horikoshii [TaxId:70601]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2bj3a1, d2bj3a2
  • Chain 'B':
    Compound: nickel responsive regulator
    Species: Pyrococcus horikoshii [TaxId:70601]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2bj3b1, d2bj3b2
  • Chain 'C':
    Compound: nickel responsive regulator
    Species: Pyrococcus horikoshii [TaxId:70601]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2bj3c1, d2bj3c2
  • Chain 'D':
    Compound: nickel responsive regulator
    Species: Pyrococcus horikoshii [TaxId:70601]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2bj3d1, d2bj3d2
  • Heterogens: MG, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >2bj3A (A:)
    melirfsisipskllekfdqiieeigyenrseairdlirdfiirhewevgneevagtiti
    vynhdegdvvkalldlqheyldeiisslhvhmdehnclevivvkgeakkikmiadkllsl
    kgvkhgklvmtstgkelv
    

    Sequence, based on observed residues (ATOM records): (download)
    >2bj3A (A:)
    melirfsisipskllekfdqiieeigyenrseairdlirdfiirhewevgneevagtiti
    vynhdegdvvkalldlqheyldeiisslhvhmdehnclevivvkgeakkikmiadkllsl
    kgvkhgklvmtstgke
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >2bj3B (B:)
    melirfsisipskllekfdqiieeigyenrseairdlirdfiirhewevgneevagtiti
    vynhdegdvvkalldlqheyldeiisslhvhmdehnclevivvkgeakkikmiadkllsl
    kgvkhgklvmtstgkelv
    

    Sequence, based on observed residues (ATOM records): (download)
    >2bj3B (B:)
    elirfsisipskllekfdqiieeigyenrseairdlirdfiirhewevgneevagtitiv
    ynhdegdvvkalldlqheyldeiisslhvhmdehnclevivvkgeakkikmiadkllslk
    gvkhgklvmtstgkelv
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2bj3C (C:)
    melirfsisipskllekfdqiieeigyenrseairdlirdfiirhewevgneevagtiti
    vynhdegdvvkalldlqheyldeiisslhvhmdehnclevivvkgeakkikmiadkllsl
    kgvkhgklvmtstgkelv
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >2bj3D (D:)
    melirfsisipskllekfdqiieeigyenrseairdlirdfiirhewevgneevagtiti
    vynhdegdvvkalldlqheyldeiisslhvhmdehnclevivvkgeakkikmiadkllsl
    kgvkhgklvmtstgkelv
    

    Sequence, based on observed residues (ATOM records): (download)
    >2bj3D (D:)
    elirfsisipskllekfdqiieeigyenrseairdlirdfiirhewevgneevagtitiv
    ynhgdvvkalldlqheyldeiisslhvhmdehnclevivvkgeakkikmiadkllslkgv
    khgklvmtstg