SCOP 1.75: Structural Classification of Proteins

PDB entry 2bfg

View 2bfg on RCSB PDB site
Description: crystal structure of beta-xylosidase (fam gh39) in complex with dinitrophenyl-beta-xyloside and covalently bound xyloside
Class: hydrolase
Keywords: beta-xylosidase, complex of the covalent intermediate, enzyme/substrate complex, family gh39, thermophilic enzyme, hydrolase
Deposited on 2004-12-07, released 2005-10-12
The last revision prior to the SCOP 1.75 freeze date was dated 2005-10-26, with a file datestamp of 2007-06-28.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.198
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: beta-xylosidase
Species: BACILLUS STEAROTHERMOPHILUS
Database cross-references and differences (RAF-indexed):
- Uniprot Q9ZFM2 (446-500)
  - conflict (1)
  - engineered mutation (159)
  - conflict (405)
- PDB 2BFG (443-445)
Domains in SCOP 1.75: d2bfga1, d2bfga2
Chain 'B':
Compound: beta-xylosidase
Species: BACILLUS STEAROTHERMOPHILUS
Database cross-references and differences (RAF-indexed):
- Uniprot Q9ZFM2 (446-500)
  - conflict (1)
  - engineered mutation (159)
  - conflict (405)
- PDB 2BFG (443-445)
Domains in SCOP 1.75: d2bfgb1, d2bfgb2
Chain 'C':
Compound: beta-xylosidase
Species: BACILLUS STEAROTHERMOPHILUS
Database cross-references and differences (RAF-indexed):
- Uniprot Q9ZFM2 (446-500)
  - conflict (1)
  - engineered mutation (159)
  - conflict (405)
- PDB 2BFG (443-445)
Domains in SCOP 1.75: d2bfgc1, d2bfgc2
Chain 'D':
Compound: beta-xylosidase
Species: BACILLUS STEAROTHERMOPHILUS
Database cross-references and differences (RAF-indexed):
- Uniprot Q9ZFM2 (446-500)
  - conflict (1)
  - engineered mutation (159)
  - conflict (405)
- PDB 2BFG (443-445)
Domains in SCOP 1.75: d2bfgd1, d2bfgd2
Chain 'E':
Compound: beta-xylosidase
Species: BACILLUS STEAROTHERMOPHILUS
Database cross-references and differences (RAF-indexed):
- Uniprot Q9ZFM2 (446-500)
  - conflict (1)
  - engineered mutation (159)
  - conflict (405)
- PDB 2BFG (443-445)
Domains in SCOP 1.75: d2bfge1, d2bfge2
Chain 'F':
Compound: beta-xylosidase
Species: BACILLUS STEAROTHERMOPHILUS
Database cross-references and differences (RAF-indexed):
- Uniprot Q9ZFM2 (446-500)
  - conflict (1)
  - engineered mutation (159)
  - conflict (405)
- PDB 2BFG (443-445)
Domains in SCOP 1.75: d2bfgf1, d2bfgf2
Chain 'G':
Compound: beta-xylosidase
Species: BACILLUS STEAROTHERMOPHILUS
Database cross-references and differences (RAF-indexed):
- Uniprot Q9ZFM2 (446-500)
  - conflict (1)
  - engineered mutation (159)
  - conflict (405)
- PDB 2BFG (443-445)
Domains in SCOP 1.75: d2bfgg1, d2bfgg2
Chain 'H':
Compound: beta-xylosidase
Species: BACILLUS STEAROTHERMOPHILUS
Database cross-references and differences (RAF-indexed):
- Uniprot Q9ZFM2 (446-500)
  - conflict (1)
  - engineered mutation (159)
  - conflict (405)
- PDB 2BFG (443-445)
Domains in SCOP 1.75: d2bfgh1, d2bfgh2
Heterogens: XYS, NA, SO4, ANX, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>2bfgA (A:)
mgvvnvpsngrekfkknwkfcvgtgrlglalqkeyldhlklvqekigfryirghgllsdd
vgiyreveidgemkpfynftyidrivdsylalnirpfiefgfmpkalasgdqtvfywkgn
vtppkdynkwrdlivavvshfierygieevrtwlfevwnapnlvnfwkdankqeyfklye
vtaravksvdphlqvggpaicggsdewitdflhfcaerrvpvdfvsrhaytskaphkktf
eyyyqeleppedmleqfktvralirqspfphlplhiteyntsyspinpvhdtalnaayia
rilseggdyvdsfsywtfsdvfeemdvpkalfhggfglvalhsipkptfhaftffnalgd
ellyrdgemivtrrkdgsiaavlwnlvmekgegltkevqlvipvsesavfikrqivneqy
gnawrvwkqmgrprfpsrqavetlrqvaqphvmteqrratdgvihlsivlsknevtliei
eqvrdetstyvglddgeitsyss