PDB entry 2bdy

View 2bdy on RCSB PDB site
Description: thrombin in complex with inhibitor
Class: hydrolase
Keywords: thrombin, complex structure
Deposited on 2005-10-21, released 2006-10-24
The last revision prior to the SCOP 1.73 freeze date was dated 2006-10-24, with a file datestamp of 2007-07-06.
Experiment type: XRAY
Resolution: 1.61 Å
R-factor: 0.194
AEROSPACI score: 0.57 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: thrombin
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d2bdya1
  • Chain 'B':
    Compound: Hirudin IIIB'
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • Uniprot P28511 (0-9)
      • modified residue (8)
  • Heterogens: NA, UNB, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2bdyA (A:)
adcglrplfekksledkterellesyidgrivegsdaeigmspwqvmlfrkspqellcga
slisdrwvltaahcllyppwdknftendllvrigkhsrtryerniekismlekiyihpry
nwrenldrdialmklkkpvafsdyihpvclpdretaasllqagykgrvtgwgnlketwta
nvgkgqpsvlqvvnlpiverpvckdstriritdnmfcagykpdegkrgdacegdsggpfv
mkspfnnrwyqmgivswgegcdrdgkygfythvfrlkkwiqkvidqfge

    Sequence, based on observed residues (ATOM records): (download) 
    >2bdyA (A:)
adcglrplfekksledkterellesyiivegsdaeigmspwqvmlfrkspqellcgasli
sdrwvltaahcllyppwdknftendllvrigkhsrtryerniekismlekiyihprynwr
enldrdialmklkkpvafsdyihpvclpdretaasllqagykgrvtgwgnlketgqpsvl
qvvnlpiverpvckdstriritdnmfcagykpdegkrgdacegdsggpfvmkspfnnrwy
qmgivswgegcdrdgkygfythvfrlkkwiqkvidq

  • Chain 'B':
    No sequence available.