PDB entry 2bck
View 2bck on RCSB PDB site
Description: Crystal Structure of HLA-A*2402 Complexed with a telomerase peptide
Class: immune system
Keywords: Immunoglobulin Domains, Beta barrels, MHC Fold
Deposited on
2005-10-19, released
2006-01-10
The last revision prior to the SCOP 1.75 freeze date was dated
2006-01-10, with a file datestamp of
2007-06-28.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.187
AEROSPACI score: 0.44
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: HLA class I histocompatibility antigen, A-24 alpha chain
Species: HOMO SAPIENS
Database cross-references and differences (RAF-indexed):
- Uniprot P05534 (0-275)
- cloning artifact (276-285)
Domains in SCOP 1.75: d2bcka1, d2bcka2 - Chain 'B':
Compound: Beta-2-microglobulin
Species: HOMO SAPIENS
Database cross-references and differences (RAF-indexed):
- Uniprot P61769 (1-99)
- initiating methionine (0)
Domains in SCOP 1.75: d2bckb1 - Chain 'C':
Compound: Telomerase reverse transcriptase
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
- Chain 'D':
Compound: HLA class I histocompatibility antigen, A-24 alpha chain
Species: HOMO SAPIENS
Database cross-references and differences (RAF-indexed):
- Uniprot P05534 (0-275)
- cloning artifact (276-285)
Domains in SCOP 1.75: d2bckd1, d2bckd2 - Chain 'E':
Compound: Beta-2-microglobulin
Species: HOMO SAPIENS
Database cross-references and differences (RAF-indexed):
- Uniprot P61769 (1-99)
- initiating methionine (0)
Domains in SCOP 1.75: d2bcke1 - Chain 'F':
Compound: Telomerase reverse transcriptase
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
- Heterogens: SO4, GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2bckA (A:)
gshsmryfstsvsrpgrgeprfiavgyvddtqfvrfdsdaasqrmeprapwieqegpeyw
deetgkvkahsqtdrenlrialryynqseagshtlqmmfgcdvgsdgrflrgyhqyaydg
kdyialkedlrswtaadmaaqitkrkweaahvaeqqraylegtcvdglrrylengketlq
rtdppkthmthhpisdheatlrcwalgfypaeitltwqrdgedqtqdtelvetrpagdgt
fqkwaavvvpsgeeqrytchvqheglpkpltlrwepgsggglndifeaqkiewh
Sequence, based on observed residues (ATOM records): (download)
>2bckA (A:)
gshsmryfstsvsrpgrgeprfiavgyvddtqfvrfdsdaasqrmeprapwieqegpeyw
deetgkvkahsqtdrenlrialryynqseagshtlqmmfgcdvgsdgrflrgyhqyaydg
kdyialkedlrswtaadmaaqitkrkweaahvaeqqraylegtcvdglrrylengketlq
rtdppkthmthhpisdheatlrcwalgfypaeitltwqrdgedqtqdtelvetrpagdgt
fqkwaavvvpsgeeqrytchvqheglpkpltlrwepgsggglndif
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>2bckB (B:)
miqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm
- Chain 'C':
No sequence available.
- Chain 'D':
Sequence, based on SEQRES records: (download)
>2bckD (D:)
gshsmryfstsvsrpgrgeprfiavgyvddtqfvrfdsdaasqrmeprapwieqegpeyw
deetgkvkahsqtdrenlrialryynqseagshtlqmmfgcdvgsdgrflrgyhqyaydg
kdyialkedlrswtaadmaaqitkrkweaahvaeqqraylegtcvdglrrylengketlq
rtdppkthmthhpisdheatlrcwalgfypaeitltwqrdgedqtqdtelvetrpagdgt
fqkwaavvvpsgeeqrytchvqheglpkpltlrwepgsggglndifeaqkiewh
Sequence, based on observed residues (ATOM records): (download)
>2bckD (D:)
gshsmryfstsvsrpgrgeprfiavgyvddtqfvrfdsdaasqrmeprapwieqegpeyw
deetgkvkahsqtdrenlrialryynqseagshtlqmmfgcdvgsdgrflrgyhqyaydg
kdyialkedlrswtaadmaaqitkrkweaahvaeqqraylegtcvdglrrylengketlq
rtdppkthmthhpisdheatlrcwalgfypaeitltwqrdgedqtqdtelvetrpagdgt
fqkwaavvvpsgeeqrytchvqheglpkpltlrwepgsggglndif
- Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
>2bckE (E:)
miqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm
- Chain 'F':
No sequence available.