PDB entry 2bas

View 2bas on RCSB PDB site
Description: Crystal Structure of the Bacillus subtilis YkuI Protein, with an EAL Domain.
Class: signaling protein
Keywords: Crystal structure,YkuI protein, EAL domain, Structural Genomics, PSI, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG
Deposited on 2005-10-14, released 2005-11-29
The last revision prior to the SCOP 1.75 freeze date was dated 2005-11-29, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.61 Å
R-factor: 0.207
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: YkuI protein
    Species: Bacillus subtilis
    Gene: ykuI
    Database cross-references and differences (RAF-indexed):
    • Uniprot O35014 (Start-430)
      • modified residue (110)
      • modified residue (118)
      • modified residue (161)
      • modified residue (337)
      • modified residue (378)
      • modified residue (380)
      • modified residue (400)
      • modified residue (408)
      • modified residue (412)
    Domains in SCOP 1.75: d2basa1, d2basa2
  • Chain 'B':
    Compound: YkuI protein
    Species: Bacillus subtilis
    Gene: ykuI
    Database cross-references and differences (RAF-indexed):
    • Uniprot O35014 (24-End)
      • cloning artifact (23)
      • modified residue (24)
      • modified residue (110)
      • modified residue (118)
      • modified residue (161)
      • modified residue (337)
      • modified residue (378)
      • modified residue (380)
      • modified residue (400)
      • modified residue (408)
      • modified residue (412)
    Domains in SCOP 1.75: d2basb1, d2basb2
  • Heterogens: BME, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2basA (A:)
mhhhhhhssgvdlgtenlyfqsnamldpldiltniddvlpyyqaifsaeeqkvvgyevlg
riladseiqslgpffldagipeeyklevdnriirqaldrfleadsdllifmnqdanllml
dhgesflellkeyeakgielhrfvleitehnfegdieqlyhmlayyrtygikiavdnigk
essnldriallspdllkidlqalkvsqpspsyehvlysisllarkigaallyedieanfq
lqyawrnggryfqgyylvspsetflerdvlkqrlktefhqfithekkkletvyehseqfy
krvhqavtslrknnlssdddfikklaeeltdcsfriymcdeegdqltgnvfkqdgewiyq
peyaeknwswrpyflenimrmrnlrkgffsdlysdletgemirtfsypmddqmylfidlp
ysylyeqdgli

    Sequence, based on observed residues (ATOM records): (download) 
    >2basA (A:)
ldpldiltniddvlpyyqaifsaeeqkvvgyevlgriladseiqslgpffldagipeeyk
levdnriirqaldrfleadsdllifmnqdanllmldhgesflellkeyeakgielhrfvl
eitehnfegdieqlyhmlayyrtygikiavdnigkessnldriallspdllkidlqalks
psyehvlysisllarkigaallyedieanfqlqyawrnggryfqgyylvspsetflerdv
lkqrlktefhqfithekkkletvyehseqfykrvhqavtslrknnlssdddfikklaeel
tdcsfriymcdeegdqltgnvfkqdgewiyqpeyaeknwswrpyflenimrmrnlrkgff
sdlysdletgemirtfsypmddqmylfidlpysylyeqdgli

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2basB (B:)
mhhhhhhssgvdlgtenlyfqsnamldpldiltniddvlpyyqaifsaeeqkvvgyevlg
riladseiqslgpffldagipeeyklevdnriirqaldrfleadsdllifmnqdanllml
dhgesflellkeyeakgielhrfvleitehnfegdieqlyhmlayyrtygikiavdnigk
essnldriallspdllkidlqalkvsqpspsyehvlysisllarkigaallyedieanfq
lqyawrnggryfqgyylvspsetflerdvlkqrlktefhqfithekkkletvyehseqfy
krvhqavtslrknnlssdddfikklaeeltdcsfriymcdeegdqltgnvfkqdgewiyq
peyaeknwswrpyflenimrmrnlrkgffsdlysdletgemirtfsypmddqmylfidlp
ysylyeqdgli

    Sequence, based on observed residues (ATOM records): (download) 
    >2basB (B:)
amldpldiltniddvlpyyqaifsaeeqkvvgyevlgriladseiqslgpffldagipee
yklevdnriirqaldrfleadsdllifmnqdanllmldhgesflellkeyeakgielhrf
vleitehnfegdieqlyhmlayyrtygikiavdnigkessnldriallspdllkidlqal
kspsyehvlysisllarkigaallyedieanfqlqyawrnggryfqgyylvspsetfler
dvlkqrlktefhqfithekkkletvyehseqfykrvhqavtslrknnlssdddfikklae
eltdcsfriymcdeegdqltgnvfkqdgewiyqpeyaeknwswrpyflenimrmrnlrkg
ffsdlysdletgemirtfsypmddqmylfidlpysyl