PDB entry 2b9u

View 2b9u on RCSB PDB site
Description: Crystal structure of dTDP-4-dehydrorhamnose 3,5-epimerase from sulfolobus tokodaii
Class: isomerase
Keywords: beta class, jelly roll-like topology, flattened barrel, isomerase
Deposited on 2005-10-13, released 2006-10-13
The last revision prior to the SCOPe 2.06 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.07 Å
R-factor: 0.209
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: hypothetical dTDP-4-dehydrorhamnose 3,5-epimerase
    Species: Sulfolobus tokodaii [TaxId:273063]
    Gene: ARCHAEA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2b9ua_
  • Chain 'B':
    Compound: hypothetical dTDP-4-dehydrorhamnose 3,5-epimerase
    Species: Sulfolobus tokodaii [TaxId:273063]
    Gene: ARCHAEA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2b9ub_
  • Chain 'C':
    Compound: hypothetical dTDP-4-dehydrorhamnose 3,5-epimerase
    Species: Sulfolobus tokodaii [TaxId:273063]
    Gene: ARCHAEA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2b9uc_
  • Chain 'D':
    Compound: hypothetical dTDP-4-dehydrorhamnose 3,5-epimerase
    Species: Sulfolobus tokodaii [TaxId:273063]
    Gene: ARCHAEA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2b9ud_
  • Chain 'E':
    Compound: hypothetical dTDP-4-dehydrorhamnose 3,5-epimerase
    Species: Sulfolobus tokodaii [TaxId:273063]
    Gene: ARCHAEA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2b9ue_
  • Chain 'F':
    Compound: hypothetical dTDP-4-dehydrorhamnose 3,5-epimerase
    Species: Sulfolobus tokodaii [TaxId:273063]
    Gene: ARCHAEA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2b9uf_
  • Chain 'G':
    Compound: hypothetical dTDP-4-dehydrorhamnose 3,5-epimerase
    Species: Sulfolobus tokodaii [TaxId:273063]
    Gene: ARCHAEA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2b9ug_
  • Chain 'H':
    Compound: hypothetical dTDP-4-dehydrorhamnose 3,5-epimerase
    Species: Sulfolobus tokodaii [TaxId:273063]
    Gene: ARCHAEA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2b9uh_
  • Chain 'I':
    Compound: hypothetical dTDP-4-dehydrorhamnose 3,5-epimerase
    Species: Sulfolobus tokodaii [TaxId:273063]
    Gene: ARCHAEA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2b9ui_
  • Chain 'J':
    Compound: hypothetical dTDP-4-dehydrorhamnose 3,5-epimerase
    Species: Sulfolobus tokodaii [TaxId:273063]
    Gene: ARCHAEA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2b9uj_
  • Chain 'K':
    Compound: hypothetical dTDP-4-dehydrorhamnose 3,5-epimerase
    Species: Sulfolobus tokodaii [TaxId:273063]
    Gene: ARCHAEA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2b9uk_
  • Chain 'L':
    Compound: hypothetical dTDP-4-dehydrorhamnose 3,5-epimerase
    Species: Sulfolobus tokodaii [TaxId:273063]
    Gene: ARCHAEA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2b9ul_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2b9uA (A:)
mpfefenlgmgiilikpkvfpdkrgfflevfksedftkmripnviqtnmsfsrkgvvrgl
hyqrtpkeqgkiifvpkgrildvavdvrkssptfgkyvkaelneenhymlwippgfahgf
qaledsiviyfithneyspphercisysyidwpikeviisdkdlqcpslekaevfd

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2b9uB (B:)
mpfefenlgmgiilikpkvfpdkrgfflevfksedftkmripnviqtnmsfsrkgvvrgl
hyqrtpkeqgkiifvpkgrildvavdvrkssptfgkyvkaelneenhymlwippgfahgf
qaledsiviyfithneyspphercisysyidwpikeviisdkdlqcpslekaevfd

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2b9uC (C:)
mpfefenlgmgiilikpkvfpdkrgfflevfksedftkmripnviqtnmsfsrkgvvrgl
hyqrtpkeqgkiifvpkgrildvavdvrkssptfgkyvkaelneenhymlwippgfahgf
qaledsiviyfithneyspphercisysyidwpikeviisdkdlqcpslekaevfd

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2b9uD (D:)
mpfefenlgmgiilikpkvfpdkrgfflevfksedftkmripnviqtnmsfsrkgvvrgl
hyqrtpkeqgkiifvpkgrildvavdvrkssptfgkyvkaelneenhymlwippgfahgf
qaledsiviyfithneyspphercisysyidwpikeviisdkdlqcpslekaevfd

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2b9uE (E:)
mpfefenlgmgiilikpkvfpdkrgfflevfksedftkmripnviqtnmsfsrkgvvrgl
hyqrtpkeqgkiifvpkgrildvavdvrkssptfgkyvkaelneenhymlwippgfahgf
qaledsiviyfithneyspphercisysyidwpikeviisdkdlqcpslekaevfd

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2b9uF (F:)
mpfefenlgmgiilikpkvfpdkrgfflevfksedftkmripnviqtnmsfsrkgvvrgl
hyqrtpkeqgkiifvpkgrildvavdvrkssptfgkyvkaelneenhymlwippgfahgf
qaledsiviyfithneyspphercisysyidwpikeviisdkdlqcpslekaevfd

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2b9uG (G:)
mpfefenlgmgiilikpkvfpdkrgfflevfksedftkmripnviqtnmsfsrkgvvrgl
hyqrtpkeqgkiifvpkgrildvavdvrkssptfgkyvkaelneenhymlwippgfahgf
qaledsiviyfithneyspphercisysyidwpikeviisdkdlqcpslekaevfd

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2b9uH (H:)
mpfefenlgmgiilikpkvfpdkrgfflevfksedftkmripnviqtnmsfsrkgvvrgl
hyqrtpkeqgkiifvpkgrildvavdvrkssptfgkyvkaelneenhymlwippgfahgf
qaledsiviyfithneyspphercisysyidwpikeviisdkdlqcpslekaevfd

  • Chain 'I':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2b9uI (I:)
mpfefenlgmgiilikpkvfpdkrgfflevfksedftkmripnviqtnmsfsrkgvvrgl
hyqrtpkeqgkiifvpkgrildvavdvrkssptfgkyvkaelneenhymlwippgfahgf
qaledsiviyfithneyspphercisysyidwpikeviisdkdlqcpslekaevfd

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2b9uJ (J:)
mpfefenlgmgiilikpkvfpdkrgfflevfksedftkmripnviqtnmsfsrkgvvrgl
hyqrtpkeqgkiifvpkgrildvavdvrkssptfgkyvkaelneenhymlwippgfahgf
qaledsiviyfithneyspphercisysyidwpikeviisdkdlqcpslekaevfd

  • Chain 'K':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2b9uK (K:)
mpfefenlgmgiilikpkvfpdkrgfflevfksedftkmripnviqtnmsfsrkgvvrgl
hyqrtpkeqgkiifvpkgrildvavdvrkssptfgkyvkaelneenhymlwippgfahgf
qaledsiviyfithneyspphercisysyidwpikeviisdkdlqcpslekaevfd

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2b9uL (L:)
mpfefenlgmgiilikpkvfpdkrgfflevfksedftkmripnviqtnmsfsrkgvvrgl
hyqrtpkeqgkiifvpkgrildvavdvrkssptfgkyvkaelneenhymlwippgfahgf
qaledsiviyfithneyspphercisysyidwpikeviisdkdlqcpslekaevfd