PDB entry 2b0l
View 2b0l on RCSB PDB site
Description: C-terminal DNA binding domain of transcriptional pleiotropic repressor CodY.
Class: DNA binding protein
Keywords: CodY, DNA-binding; Nucleotide-binding; Repressor; Transcription regulation; Winged HTH motif., DNA BINDING PROTEIN
Deposited on
2005-09-14, released
2006-02-21
The last revision prior to the SCOPe 2.07 freeze date was dated
2017-10-11, with a file datestamp of
2017-10-06.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: N/A
AEROSPACI score: 0.12
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: GTP-sensing transcriptional pleiotropic repressor codY
Species: Bacillus subtilis [TaxId:1423]
Gene: codY
Database cross-references and differences (RAF-indexed):
- Uniprot P39779 (10-End)
- expression tag (3-8)
- initiating methionine (9)
Domains in SCOPe 2.07: d2b0la1, d2b0la2 - Chain 'B':
Compound: GTP-sensing transcriptional pleiotropic repressor codY
Species: Bacillus subtilis [TaxId:1423]
Gene: codY
Database cross-references and differences (RAF-indexed):
- Uniprot P39779 (10-End)
- expression tag (5-8)
- initiating methionine (9)
Domains in SCOPe 2.07: d2b0lb2, d2b0lb3 - Chain 'C':
Compound: GTP-sensing transcriptional pleiotropic repressor codY
Species: Bacillus subtilis [TaxId:1423]
Gene: codY
Database cross-references and differences (RAF-indexed):
- Uniprot P39779 (10-End)
- expression tag (5-8)
- initiating methionine (9)
Domains in SCOPe 2.07: d2b0lc2, d2b0lc3 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2b0lA (A:)
gsshhhhhhmskavvqmaisslsyseleaiehifeeldgnegllvaskiadrvgitrsvi
vnalrklesagviesrslgmkgtyikvlnnkflielenlksh
Sequence, based on observed residues (ATOM records): (download)
>2b0lA (A:)
hhhhhhmskavvqmaisslsyseleaiehifeeldgnegllvaskiadrvgitrsvivna
lrklesagviesrslgmkgtyikvlnnkflielenlks
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2b0lB (B:)
gsshhhhhhmskavvqmaisslsyseleaiehifeeldgnegllvaskiadrvgitrsvi
vnalrklesagviesrslgmkgtyikvlnnkflielenlksh
Sequence, based on observed residues (ATOM records): (download)
>2b0lB (B:)
hhhhmskavvqmaisslsyseleaiehifeeldgnegllvaskiadrvgitrsvivnalr
klesagviesrslgmkgtyikvlnnkflielenlk
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2b0lC (C:)
gsshhhhhhmskavvqmaisslsyseleaiehifeeldgnegllvaskiadrvgitrsvi
vnalrklesagviesrslgmkgtyikvlnnkflielenlksh
Sequence, based on observed residues (ATOM records): (download)
>2b0lC (C:)
hhhhmskavvqmaisslsyseleaiehifeeldgnegllvaskiadrvgitrsvivnalr
klesagviesrslgmkgtyikvlnnkflielenl