PDB entry 2az3

View 2az3 on RCSB PDB site
Description: Structure of a halophilic nucleoside diphosphate kinase from Halobacterium salinarum in complex with CDP
Class: transferase
Keywords: halophilic, TRANSFERASE
Deposited on 2005-09-09, released 2005-12-20
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-10-11, with a file datestamp of 2017-10-06.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: N/A
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Nucleoside diphosphate kinase
    Species: Halobacterium salinarum [TaxId:2242]
    Gene: ndk
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2az3a_
  • Chain 'B':
    Compound: Nucleoside diphosphate kinase
    Species: Halobacterium salinarum [TaxId:2242]
    Gene: ndk
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2az3b_
  • Chain 'C':
    Compound: Nucleoside diphosphate kinase
    Species: Halobacterium salinarum [TaxId:2242]
    Gene: ndk
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2az3c_
  • Chain 'D':
    Compound: Nucleoside diphosphate kinase
    Species: Halobacterium salinarum [TaxId:2242]
    Gene: ndk
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2az3d_
  • Chain 'E':
    Compound: Nucleoside diphosphate kinase
    Species: Halobacterium salinarum [TaxId:2242]
    Gene: ndk
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2az3e_
  • Chain 'F':
    Compound: Nucleoside diphosphate kinase
    Species: Halobacterium salinarum [TaxId:2242]
    Gene: ndk
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2az3f_
  • Chain 'G':
    Compound: Nucleoside diphosphate kinase
    Species: Halobacterium salinarum [TaxId:2242]
    Gene: ndk
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2az3g_
  • Chain 'H':
    Compound: Nucleoside diphosphate kinase
    Species: Halobacterium salinarum [TaxId:2242]
    Gene: ndk
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2az3h_
  • Chain 'I':
    Compound: Nucleoside diphosphate kinase
    Species: Halobacterium salinarum [TaxId:2242]
    Gene: ndk
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2az3i_
  • Heterogens: MG, CDP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2az3A (A:)
gshmtdhdertfvmvkpdgvqrgligdivtrletkglkmvggkfmrideelahehyaehe
dkpffdglvsfitsgpvfamvwegadatrqvrqlmgatdaqdaapgtirgdygndlghnl
ihgsdhedeganereialffdddelvdwdrdasawvyedladhd

    Sequence, based on observed residues (ATOM records): (download) 
    >2az3A (A:)
hdertfvmvkpdgvqrgligdivtrletkglkmvggkfmrideelahehyaehedkpffd
glvsfitsgpvfamvwegadatrqvrqlmgatdaqdaapgtirgdygndlghnlihgsdh
edeganereialffdddelvdwdrdasawvye

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2az3B (B:)
gshmtdhdertfvmvkpdgvqrgligdivtrletkglkmvggkfmrideelahehyaehe
dkpffdglvsfitsgpvfamvwegadatrqvrqlmgatdaqdaapgtirgdygndlghnl
ihgsdhedeganereialffdddelvdwdrdasawvyedladhd

    Sequence, based on observed residues (ATOM records): (download) 
    >2az3B (B:)
dertfvmvkpdgvqrgligdivtrletkglkmvggkfmrideelahehyaehedkpffdg
lvsfitsgpvfamvwegadatrqvrqlmgatdaqdaapgtirgdygndlghnlihgsdhe
deganereialffdddelvdwdrdasawvye

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2az3C (C:)
gshmtdhdertfvmvkpdgvqrgligdivtrletkglkmvggkfmrideelahehyaehe
dkpffdglvsfitsgpvfamvwegadatrqvrqlmgatdaqdaapgtirgdygndlghnl
ihgsdhedeganereialffdddelvdwdrdasawvyedladhd

    Sequence, based on observed residues (ATOM records): (download) 
    >2az3C (C:)
hdertfvmvkpdgvqrgligdivtrletkglkmvggkfmrideelahehyaehedkpffd
glvsfitsgpvfamvwegadatrqvrqlmgatdaqdaapgtirgdygndlghnlihgsdh
edeganereialffdddelvdwdrdasawvyed

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2az3D (D:)
gshmtdhdertfvmvkpdgvqrgligdivtrletkglkmvggkfmrideelahehyaehe
dkpffdglvsfitsgpvfamvwegadatrqvrqlmgatdaqdaapgtirgdygndlghnl
ihgsdhedeganereialffdddelvdwdrdasawvyedladhd

    Sequence, based on observed residues (ATOM records): (download) 
    >2az3D (D:)
hdertfvmvkpdgvqrgligdivtrletkglkmvggkfmrideelahehyaehedkpffd
glvsfitsgpvfamvwegadatrqvrqlmgatdaqdaapgtirgdygndlghnlihgsdh
edeganereialffdddelvdwdrdasawvye

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >2az3E (E:)
gshmtdhdertfvmvkpdgvqrgligdivtrletkglkmvggkfmrideelahehyaehe
dkpffdglvsfitsgpvfamvwegadatrqvrqlmgatdaqdaapgtirgdygndlghnl
ihgsdhedeganereialffdddelvdwdrdasawvyedladhd

    Sequence, based on observed residues (ATOM records): (download) 
    >2az3E (E:)
hdertfvmvkpdgvqrgligdivtrletkglkmvggkfmrideelahehyaehedkpffd
glvsfitsgpvfamvwegadatrqvrqlmgatdaqdaapgtirgdygndlghnlihgsdh
edeganereialffdddelvdwdrdasawvye

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >2az3F (F:)
gshmtdhdertfvmvkpdgvqrgligdivtrletkglkmvggkfmrideelahehyaehe
dkpffdglvsfitsgpvfamvwegadatrqvrqlmgatdaqdaapgtirgdygndlghnl
ihgsdhedeganereialffdddelvdwdrdasawvyedladhd

    Sequence, based on observed residues (ATOM records): (download) 
    >2az3F (F:)
hdertfvmvkpdgvqrgligdivtrletkglkmvggkfmrideelahehyaehedkpffd
glvsfitsgpvfamvwegadatrqvrqlmgatdaqdaapgtirgdygndlghnlihgsdh
edeganereialffdddelvdwdrdasawvye

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >2az3G (G:)
gshmtdhdertfvmvkpdgvqrgligdivtrletkglkmvggkfmrideelahehyaehe
dkpffdglvsfitsgpvfamvwegadatrqvrqlmgatdaqdaapgtirgdygndlghnl
ihgsdhedeganereialffdddelvdwdrdasawvyedladhd

    Sequence, based on observed residues (ATOM records): (download) 
    >2az3G (G:)
hdertfvmvkpdgvqrgligdivtrletkglkmvggkfmrideelahehyaehedkpffd
glvsfitsgpvfamvwegadatrqvrqlmgatdaqdaapgtirgdygndlghnlihgsdh
edeganereialffdddelvdwdrdasawvye

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >2az3H (H:)
gshmtdhdertfvmvkpdgvqrgligdivtrletkglkmvggkfmrideelahehyaehe
dkpffdglvsfitsgpvfamvwegadatrqvrqlmgatdaqdaapgtirgdygndlghnl
ihgsdhedeganereialffdddelvdwdrdasawvyedladhd

    Sequence, based on observed residues (ATOM records): (download) 
    >2az3H (H:)
hdertfvmvkpdgvqrgligdivtrletkglkmvggkfmrideelahehyaehedkpffd
glvsfitsgpvfamvwegadatrqvrqlmgatdaqdaapgtirgdygndlghnlihgsdh
edeganereialffdddelvdwdrdasawvye

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >2az3I (I:)
gshmtdhdertfvmvkpdgvqrgligdivtrletkglkmvggkfmrideelahehyaehe
dkpffdglvsfitsgpvfamvwegadatrqvrqlmgatdaqdaapgtirgdygndlghnl
ihgsdhedeganereialffdddelvdwdrdasawvyedladhd

    Sequence, based on observed residues (ATOM records): (download) 
    >2az3I (I:)
dertfvmvkpdgvqrgligdivtrletkglkmvggkfmrideelahehyaehedkpffdg
lvsfitsgpvfamvwegadatrqvrqlmgatdaqdaapgtirgdygndlghnlihgsdhe
deganereialffdddelvdwdrdasawvye