PDB entry 2axy

View 2axy on RCSB PDB site
Description: Crystal Structure of KH1 domain of human Poly(C)-binding protein-2 with C-rich strand of human telomeric DNA
Class: DNA binding protein/DNA
Keywords: protein-dna complex, DNA BINDING PROTEIN-DNA COMPLEX
Deposited on 2005-09-06, released 2005-09-27
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.215
AEROSPACI score: 0.52 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Poly(rC)-binding protein 2
    Species: Homo sapiens [TaxId:9606]
    Gene: PCBP2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q15366 (1-End)
      • cloning artifact (0)
      • modified residue (10)
      • modified residue (29)
      • modified residue (64)
    Domains in SCOPe 2.08: d2axya1, d2axya2
  • Chain 'B':
    Compound: Poly(rC)-binding protein 2
    Species: Homo sapiens [TaxId:9606]
    Gene: PCBP2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q15366 (Start-72)
      • modified residue (10)
      • modified residue (29)
      • modified residue (64)
    Domains in SCOPe 2.08: d2axyb_
  • Chain 'C':
    Compound: Poly(rC)-binding protein 2
    Species: Homo sapiens [TaxId:9606]
    Gene: PCBP2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q15366 (1-End)
      • cloning artifact (0)
      • modified residue (10)
      • modified residue (29)
      • modified residue (64)
    Domains in SCOPe 2.08: d2axyc2, d2axyc3
  • Chain 'D':
    Compound: Poly(rC)-binding protein 2
    Species: Homo sapiens [TaxId:9606]
    Gene: PCBP2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q15366 (Start-72)
      • modified residue (10)
      • modified residue (29)
      • modified residue (64)
    Domains in SCOPe 2.08: d2axyd_
  • Chain 'E':
    Compound: C-rich strand of human telomeric DNA
  • Chain 'F':
    Compound: C-rich strand of human telomeric DNA
  • Chain 'G':
    Compound: C-rich strand of human telomeric DNA
  • Chain 'H':
    Compound: C-rich strand of human telomeric DNA
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2axyA (A:)
knvtltirllmhgkevgsiigkkgesvkkmreesgarinisegncperiitlagptnaif
kafamiidkleed

    Sequence, based on observed residues (ATOM records): (download) 
    >2axyA (A:)
knvtltirllmhgkevgsiigkkgesvkkmreesgarinisegncperiitlagptnaif
kafamiidklee

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2axyB (B:)
knvtltirllmhgkevgsiigkkgesvkkmreesgarinisegncperiitlagptnaif
kafamiidkleed

    Sequence, based on observed residues (ATOM records): (download) 
    >2axyB (B:)
vtltirllmhgkevgsiigkkgesvkkmreesgarinisegncperiitlagptnaifka
famiidkleed

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2axyC (C:)
knvtltirllmhgkevgsiigkkgesvkkmreesgarinisegncperiitlagptnaif
kafamiidkleed

    Sequence, based on observed residues (ATOM records): (download) 
    >2axyC (C:)
knvtltirllmhgkevgsiigkkgesvkkmreesgarinisegncperiitlagptnaif
kafamiidklee

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2axyD (D:)
knvtltirllmhgkevgsiigkkgesvkkmreesgarinisegncperiitlagptnaif
kafamiidkleed

    Sequence, based on observed residues (ATOM records): (download) 
    >2axyD (D:)
vtltirllmhgkevgsiigkkgesvkkmreesgarinisegncperiitlagptnaifka
famiidkleed

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.

  • Chain 'G':
    No sequence available.

  • Chain 'H':
    No sequence available.