PDB entry 2atq

View 2atq on RCSB PDB site
Description: RB69 single-stranded DNA binding protein-DNA polymerase fusion
Class: transferase/DNA binding protein
Keywords: DNA polymerase, palm domain, fingers domain, thumb domain, single-stranded DNA binding protein, OB-fold
Deposited on 2005-08-25, released 2006-05-09
The last revision prior to the SCOP 1.75 freeze date was dated 2006-08-29, with a file datestamp of 2007-06-28.
Experiment type: XRAY
Resolution: 3.2 Å
R-factor: 0.284
AEROSPACI score: 0.11 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA polymerase
    Species: Bacteriophage RB69
    Gene: 43
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q38087 (0-902)
      • engineered (221)
      • engineered (326)
    Domains in SCOP 1.75: d2atqa1, d2atqa2
  • Chain 'B':
    Compound: gp32
    Species: Enterobacteria phage RB69
    Gene: gp32
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2atqb1
  • Heterogens: ZN, GDP

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2atqA (A:)
mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrk
lfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtsp
dgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevps
eiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestak
rlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnv
gklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfs
piktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsii
rqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfn
qrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslne
mlfraqrtevagmtaqinrkllinslygalgnvwfryydlrnataittfgqmalqwierk
vneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarerme
paidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkkryalnvwdmegtry
aepklkimgletqksstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisia
svssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnp
fgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdm
fdf

    Sequence, based on observed residues (ATOM records): (download) 
    >2atqA (A:)
mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrk
lfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtsp
dgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevps
eiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestak
rlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnv
gklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfs
piktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsii
rqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfn
qrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslne
mlfraqrtevagmtaqinrkllinslygalgnvwfryydlrnataittfgqmalqwierk
vneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarerme
paidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkkryalnvwdmegtry
aepklkimgletqksstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisia
svssanniakpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslf
dmfdf

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2atqB (B:)
mkgfssedkgewklkldasgngqavirflpaktddalpfailvnhgfkkngkwyietcss
thgdydscpvcqyiskndlyntnkteysqlkrktsywanilvvkdpqapdnegkvfkyrf
gkkiwdkinamiavdtemgetpvdvtcpweganfvlkvkqvsgfsnydeskflnqsaipn
iddesfqkelfeqmvdlsemtskdkfksfeelntkfnqvlgtaalggaaaaaas

    Sequence, based on observed residues (ATOM records): (download) 
    >2atqB (B:)
klkldasgngqavirflpaktddalpfailvnhgfkkngkwyietcssthgdydscpvcq
yiskndlyntnkteysqlkrktsywanilvvkdpqapdnegkvfkyrfgkkiwdkinami
avdtemgetpvdvtcpweganfvlkvkqvsgfsnydeskflnqsaipniddesfqkelfe
qmvdlsemtskdkfksfeelntkfnqvlgt