PDB entry 2amp

View 2amp on RCSB PDB site
Description: Crystal Structure Of Porcine Transmissible Gastroenteritis Virus Mpro in Complex with an Inhibitor N1
Class: Hydrolase
Keywords: anti-parallel b-barrel, anti-parallel a-helices
Deposited on 2005-08-10, released 2005-09-13
The last revision prior to the SCOP 1.73 freeze date was dated 2005-10-04, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.234
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 3C-like proteinase
    Species: Transmissible gastroenteritis virus
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d2ampa1
  • Chain 'B':
    Compound: 3C-like proteinase
    Species: Transmissible gastroenteritis virus
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d2ampb1
  • Heterogens: I12, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >2ampA (A:)
    gssglrkmaqpsglvepcivrvsygnnvlnglwlgdevicprhviasdttrvinyenems
    svrlhnfsvsknnvflgvvsarykgvnlvlkvnqvnpntpehkfksikagesfnilacye
    gcpgsvygvnmrsqgtikgsfiagtcgsvgyvlengilyfvymhhlelgngshvgsnfeg
    emyggyedqpsmqlegtnvmssdnvvaflyaalingerwfvtntsmslesyntwaktnsf
    telsstdafsmlaaktgqsveklldsivrlnkgfggrtilsygslcdeftptevirqmyg
    vnlq
    

    Sequence, based on observed residues (ATOM records): (download)
    >2ampA (A:)
    sglrkmaqpsglvepcivrvsygnnvlnglwlgdevicprhviasdttrvinyenemssv
    rlhnfsvsknnvflgvvsarykgvnlvlkvnqvnpntpehkfksikagesfnilacyegc
    pgsvygvnmrsqgtikgsfiagtcgsvgyvlengilyfvymhhlelgngshvgsnfegem
    yggyedqpsmqlegtnvmssdnvvaflyaalingerwfvtntsmslesyntwaktnsfte
    lsstdafsmlaaktgqsveklldsivrlnkgfggrtilsygslcdeftptevirqmygv
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >2ampB (B:)
    gssglrkmaqpsglvepcivrvsygnnvlnglwlgdevicprhviasdttrvinyenems
    svrlhnfsvsknnvflgvvsarykgvnlvlkvnqvnpntpehkfksikagesfnilacye
    gcpgsvygvnmrsqgtikgsfiagtcgsvgyvlengilyfvymhhlelgngshvgsnfeg
    emyggyedqpsmqlegtnvmssdnvvaflyaalingerwfvtntsmslesyntwaktnsf
    telsstdafsmlaaktgqsveklldsivrlnkgfggrtilsygslcdeftptevirqmyg
    vnlq
    

    Sequence, based on observed residues (ATOM records): (download)
    >2ampB (B:)
    sglrkmaqpsglvepcivrvsygnnvlnglwlgdevicprhviasdttrvinyenemssv
    rlhnfsvsknnvflgvvsarykgvnlvlkvnqvnpntpehkfksikagesfnilacyegc
    pgsvygvnmrsqgtikgsfiagtcgsvgyvlengilyfvymhhlelgngshvgsnfegem
    yggyedqpsmqlegtnvmssdnvvaflyaalingerwfvtntsmslesyntwaktnsfte
    lsstdafsmlaaktgqsveklldsivrlnkgfggrtilsygslcdeftptevirqmygv