PDB entry 2ahv

View 2ahv on RCSB PDB site
Description: Crystal Structure of Acyl-CoA transferase from E. coli O157:H7 (YdiF)-thioester complex with CoA- 1
Class: transferase
Keywords: YdiF, CoA transferase, Glutamyl thioester, Structural Genomics, Montreal-Kingston Bacterial Structural Genomics Initiative, BSGI, TRANSFERASE
Deposited on 2005-07-28, released 2005-11-01
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.186
AEROSPACI score: 0.46 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: putative enzyme YdiF
    Species: Escherichia coli [TaxId:83334]
    Gene: YdiF
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2ahva1, d2ahva2
  • Chain 'B':
    Compound: putative enzyme YdiF
    Species: Escherichia coli [TaxId:83334]
    Gene: YdiF
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2ahvb1, d2ahvb2
  • Chain 'C':
    Compound: putative enzyme YdiF
    Species: Escherichia coli [TaxId:83334]
    Gene: YdiF
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2ahvc1, d2ahvc2
  • Chain 'D':
    Compound: putative enzyme YdiF
    Species: Escherichia coli [TaxId:83334]
    Gene: YdiF
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2ahvd1, d2ahvd2
  • Heterogens: COA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2ahvA (A:)
mkpvkppringrvpvlsaqeavnyipdeatlcvlgagggileattlitaladkykqtqtp
rnlsiisptglgdradrgisplaqeglvkwalcghwgqsprisdlaeqnkiiaynypqgv
ltqtlraaaahqpgiisdigigtfvdprqqggklnevtkedliklvefdnkeylyykaia
pdiafirattcdsegyatfedevmyldalviaqavhnnggivmmqvqkmvkkatlhpksv
ripgylvdivvvdpdqsqlyggapvnrfisgdftlddstklslplnqrklvarralfemr
kgavgnvgvgiadgiglvareegcaddfiltvetgpiggitsqgiafganvntraildmt
sqfdfyhgggldvcylsfaevdqhgnvgvhkfngkimgtggfidisatskkiifcgtlta
gslkteiadgklnivqegrvkkfirelpeitfsgkialergldvryiteravftlkedgl
hlieiapgvdlqkdildkmdftpvispelklmderlfidaamgfvlpeaah

    Sequence, based on observed residues (ATOM records): (download) 
    >2ahvA (A:)
vkppringrvpvlsaqeavnyipdeatlcvlgagggileattlitaladkykqtqtprnl
siisptglgdradrgisplaqeglvkwalcghwgqsprisdlaeqnkiiaynypqgvltq
tlraaaahqpgiisdigigtfvdprqqggklnevtkedliklvefdnkeylyykaiapdi
afirattcdsegyatfedevmyldalviaqavhnnggivmmqvqkmvkkatlhpksvrip
gylvdivvvdpdqsqlyggapvnrfisgdftldplnqrklvarralfemrkgavgnvgvg
iadgiglvareegcaddfiltvetgpiggitanvntraildmtsqfdfyhgggldvcyls
faevdqhgnvgvhkfngkimgtggfidisatskkiifcgtltagslkteiadgklnivqe
grvkkfirelpeitfsgkialergldvryiteravftlkedglhlieiapgvdlqkdild
kmdftpvispelklmderlfidaamgfvlpea

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2ahvB (B:)
mkpvkppringrvpvlsaqeavnyipdeatlcvlgagggileattlitaladkykqtqtp
rnlsiisptglgdradrgisplaqeglvkwalcghwgqsprisdlaeqnkiiaynypqgv
ltqtlraaaahqpgiisdigigtfvdprqqggklnevtkedliklvefdnkeylyykaia
pdiafirattcdsegyatfedevmyldalviaqavhnnggivmmqvqkmvkkatlhpksv
ripgylvdivvvdpdqsqlyggapvnrfisgdftlddstklslplnqrklvarralfemr
kgavgnvgvgiadgiglvareegcaddfiltvetgpiggitsqgiafganvntraildmt
sqfdfyhgggldvcylsfaevdqhgnvgvhkfngkimgtggfidisatskkiifcgtlta
gslkteiadgklnivqegrvkkfirelpeitfsgkialergldvryiteravftlkedgl
hlieiapgvdlqkdildkmdftpvispelklmderlfidaamgfvlpeaah

    Sequence, based on observed residues (ATOM records): (download) 
    >2ahvB (B:)
vkppringrvpvlsaqeavnyipdeatlcvlgagggileattlitaladkykqtqtprnl
siisptglgdradrgisplaqeglvkwalcghwgqsprisdlaeqnkiiaynypqgvltq
tlraaaahqpgiisdigigtfvdprqqggklnevtkedliklvefdnkeylyykaiapdi
afirattcdsegyatfedevmyldalviaqavhnnggivmmqvqkmvkkatlhpksvrip
gylvdivvvdpdqsqlyggapvnrfisgdftldplnqrklvarralfemrkgavgnvgvg
iadgiglvareegcaddfiltvetgpiggitanvntraildmtsqfdfyhgggldvcyls
faevdqhgnvgvhkfngkimgtggfidisatskkiifcgtltagslkteiadgklnivqe
grvkkfirelpeitfsgkialergldvryiteravftlkedglhlieiapgvdlqkdild
kmdftpvispelklmderlfidaamgfvlpea

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2ahvC (C:)
mkpvkppringrvpvlsaqeavnyipdeatlcvlgagggileattlitaladkykqtqtp
rnlsiisptglgdradrgisplaqeglvkwalcghwgqsprisdlaeqnkiiaynypqgv
ltqtlraaaahqpgiisdigigtfvdprqqggklnevtkedliklvefdnkeylyykaia
pdiafirattcdsegyatfedevmyldalviaqavhnnggivmmqvqkmvkkatlhpksv
ripgylvdivvvdpdqsqlyggapvnrfisgdftlddstklslplnqrklvarralfemr
kgavgnvgvgiadgiglvareegcaddfiltvetgpiggitsqgiafganvntraildmt
sqfdfyhgggldvcylsfaevdqhgnvgvhkfngkimgtggfidisatskkiifcgtlta
gslkteiadgklnivqegrvkkfirelpeitfsgkialergldvryiteravftlkedgl
hlieiapgvdlqkdildkmdftpvispelklmderlfidaamgfvlpeaah

    Sequence, based on observed residues (ATOM records): (download) 
    >2ahvC (C:)
vkppringrvpvlsaqeavnyipdeatlcvlgagggileattlitaladkykqtqtprnl
siisptglgdradrgisplaqeglvkwalcghwgqsprisdlaeqnkiiaynypqgvltq
tlraaaahqpgiisdigigtfvdprqqggklnevtkedliklvefdnkeylyykaiapdi
afirattcdsegyatfedevmyldalviaqavhnnggivmmqvqkmvkkatlhpksvrip
gylvdivvvdpdqsqlyggapvnrfisgdftldplnqrklvarralfemrkgavgnvgvg
iadgiglvareegcaddfiltvetgpiggitanvntraildmtsqfdfyhgggldvcyls
faevdqhgnvgvhkfngkimgtggfidisatskkiifcgtltagslkteiadgklnivqe
grvkkfirelpeitfsgkialergldvryiteravftlkedglhlieiapgvdlqkdild
kmdftpvispelklmderlfidaamgfvlpea

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2ahvD (D:)
mkpvkppringrvpvlsaqeavnyipdeatlcvlgagggileattlitaladkykqtqtp
rnlsiisptglgdradrgisplaqeglvkwalcghwgqsprisdlaeqnkiiaynypqgv
ltqtlraaaahqpgiisdigigtfvdprqqggklnevtkedliklvefdnkeylyykaia
pdiafirattcdsegyatfedevmyldalviaqavhnnggivmmqvqkmvkkatlhpksv
ripgylvdivvvdpdqsqlyggapvnrfisgdftlddstklslplnqrklvarralfemr
kgavgnvgvgiadgiglvareegcaddfiltvetgpiggitsqgiafganvntraildmt
sqfdfyhgggldvcylsfaevdqhgnvgvhkfngkimgtggfidisatskkiifcgtlta
gslkteiadgklnivqegrvkkfirelpeitfsgkialergldvryiteravftlkedgl
hlieiapgvdlqkdildkmdftpvispelklmderlfidaamgfvlpeaah

    Sequence, based on observed residues (ATOM records): (download) 
    >2ahvD (D:)
vkppringrvpvlsaqeavnyipdeatlcvlgagggileattlitaladkykqtqtprnl
siisptglgdradrgisplaqeglvkwalcghwgqsprisdlaeqnkiiaynypqgvltq
tlraaaahqpgiisdigigtfvdprqqggklnevtkedliklvefdnkeylyykaiapdi
afirattcdsegyatfedevmyldalviaqavhnnggivmmqvqkmvkkatlhpksvrip
gylvdivvvdpdqsqlyggapvnrfisgdftldplnqrklvarralfemrkgavgnvgvg
iadgiglvareegcaddfiltvetgpiggitanvntraildmtsqfdfyhgggldvcyls
faevdqhgnvgvhkfngkimgtggfidisatskkiifcgtltagslkteiadgklnivqe
grvkkfirelpeitfsgkialergldvryiteravftlkedglhlieiapgvdlqkdild
kmdftpvispelklmderlfidaamgfvlpea