SCOPe 2.06: Structural Classification of Proteins

PDB entry 2afi

View 2afi on RCSB PDB site
Description: Crystal Structure of MgADP bound Av2-Av1 Complex
Class: oxidoreductase
Keywords: Nitrogen fixation, Iron-sulfur, Metal-binding, Molybdenum, oxidoreductase
Deposited on 2005-07-25, released 2005-09-06
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-05-05, with a file datestamp of 2009-05-01.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: 0.229
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: Nitrogenase molybdenum-iron protein
Species: Azotobacter vinelandii [TaxId:354]
Database cross-references and differences (RAF-indexed):
- Uniprot P07328
Domains in SCOPe 2.06: d2afia_
Chain 'B':
Compound: Nitrogenase molybdenum-iron protein
Species: Azotobacter vinelandii [TaxId:354]
Database cross-references and differences (RAF-indexed):
- Uniprot P07329 (0-521)
Domains in SCOPe 2.06: d2afib_
Chain 'C':
Compound: Nitrogenase molybdenum-iron protein
Species: Azotobacter vinelandii [TaxId:354]
Database cross-references and differences (RAF-indexed):
- Uniprot P07328
Domains in SCOPe 2.06: d2afic_
Chain 'D':
Compound: Nitrogenase molybdenum-iron protein
Species: Azotobacter vinelandii [TaxId:354]
Database cross-references and differences (RAF-indexed):
- Uniprot P07329 (0-521)
Domains in SCOPe 2.06: d2afid_
Chain 'E':
Compound: nitrogenase iron protein 1
Species: Azotobacter vinelandii [TaxId:354]
Database cross-references and differences (RAF-indexed):
- Uniprot P00459 (0-End)
Domains in SCOPe 2.06: d2afie_
Chain 'F':
Compound: nitrogenase iron protein 1
Species: Azotobacter vinelandii [TaxId:354]
Database cross-references and differences (RAF-indexed):
- Uniprot P00459 (0-End)
Domains in SCOPe 2.06: d2afif_
Chain 'G':
Compound: nitrogenase iron protein 1
Species: Azotobacter vinelandii [TaxId:354]
Database cross-references and differences (RAF-indexed):
- Uniprot P00459 (0-End)
Domains in SCOPe 2.06: d2afig_
Chain 'H':
Compound: nitrogenase iron protein 1
Species: Azotobacter vinelandii [TaxId:354]
Database cross-references and differences (RAF-indexed):
- Uniprot P00459
Domains in SCOPe 2.06: d2afih_
Chain 'I':
Compound: Nitrogenase molybdenum-iron protein
Species: Azotobacter vinelandii [TaxId:354]
Database cross-references and differences (RAF-indexed):
- Uniprot P07328
Domains in SCOPe 2.06: d2afii_
Chain 'J':
Compound: Nitrogenase molybdenum-iron protein
Species: Azotobacter vinelandii [TaxId:354]
Database cross-references and differences (RAF-indexed):
- Uniprot P07329 (0-521)
Domains in SCOPe 2.06: d2afij_
Chain 'K':
Compound: Nitrogenase molybdenum-iron protein
Species: Azotobacter vinelandii [TaxId:354]
Database cross-references and differences (RAF-indexed):
- Uniprot P07328
Domains in SCOPe 2.06: d2afik_
Chain 'L':
Compound: Nitrogenase molybdenum-iron protein
Species: Azotobacter vinelandii [TaxId:354]
Database cross-references and differences (RAF-indexed):
- Uniprot P07329 (0-521)
Domains in SCOPe 2.06: d2afil_
Chain 'M':
Compound: nitrogenase iron protein 1
Species: Azotobacter vinelandii [TaxId:354]
Database cross-references and differences (RAF-indexed):
- Uniprot P00459
Domains in SCOPe 2.06: d2afim_
Chain 'N':
Compound: nitrogenase iron protein 1
Species: Azotobacter vinelandii [TaxId:354]
Database cross-references and differences (RAF-indexed):
- Uniprot P00459
Domains in SCOPe 2.06: d2afin_
Chain 'O':
Compound: nitrogenase iron protein 1
Species: Azotobacter vinelandii [TaxId:354]
Database cross-references and differences (RAF-indexed):
- Uniprot P00459
Domains in SCOPe 2.06: d2afio_
Chain 'P':
Compound: nitrogenase iron protein 1
Species: Azotobacter vinelandii [TaxId:354]
Database cross-references and differences (RAF-indexed):
- Uniprot P00459
Domains in SCOPe 2.06: d2afip_
Heterogens: CA, MG, HCA, CFN, CLF, SF4, ADP, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>2afiA (A:)
tgmsreevesliqevlevypekarkdrnkhlavndpavtqskkciisnkksqpglmtirg
cayagskgvvwgpikdmihishgpvgcgqysragrrnyyigttgvnafvtmnftsdfqek
divfggdkklaklidevetlfplnkgisvqsecpigligddiesvskvkgaelsktivpv
rcegfrgvsqslghhiandavrdwvlgkrdedttfastpydvaiigdyniggdawssril
leemglrcvaqwsgdgsiseieltpkvklnlvhcyrsmnyisrhmeekygipwmeynffg
ptktieslraiaakfdesiqkkceeviakykpeweavvakyrprlegkrvmlyigglrpr
hvigayedlgmevvgtgyefahnddydrtmkemgdstllyddvtgyefeefvkrikpdli
gsgikekfifqkmgipfremhswdysgpyhgfdgfaifardmdmtlnnpcwkklqapwea
segaekvaasa