PDB entry 2a8y

View 2a8y on RCSB PDB site
Description: Crystal structure of 5'-deoxy-5'methylthioadenosine phosphorylase complexed with 5'-deoxy-5'methylthioadenosine and sulfate
Class: transferase
Keywords: alpha/beta, beta sheet, beta barrel, transferase
Deposited on 2005-07-10, released 2006-03-28
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.45 Å
R-factor: 0.182
AEROSPACI score: 0.57 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 5'-methylthioadenosine phosphorylase (mtaP)
    Species: Sulfolobus solfataricus [TaxId:2287]
    Gene: SsMTAPII
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2a8ya_
  • Chain 'B':
    Compound: 5'-methylthioadenosine phosphorylase (mtaP)
    Species: Sulfolobus solfataricus [TaxId:2287]
    Gene: SsMTAPII
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2a8yb_
  • Chain 'C':
    Compound: 5'-methylthioadenosine phosphorylase (mtaP)
    Species: Sulfolobus solfataricus [TaxId:2287]
    Gene: SsMTAPII
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2a8yc_
  • Chain 'D':
    Compound: 5'-methylthioadenosine phosphorylase (mtaP)
    Species: Sulfolobus solfataricus [TaxId:2287]
    Gene: SsMTAPII
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2a8yd_
  • Chain 'E':
    Compound: 5'-methylthioadenosine phosphorylase (mtaP)
    Species: Sulfolobus solfataricus [TaxId:2287]
    Gene: SsMTAPII
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2a8ye_
  • Chain 'F':
    Compound: 5'-methylthioadenosine phosphorylase (mtaP)
    Species: Sulfolobus solfataricus [TaxId:2287]
    Gene: SsMTAPII
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2a8yf_
  • Chain 'G':
    Compound: 5'-methylthioadenosine phosphorylase (mtaP)
    Species: Sulfolobus solfataricus [TaxId:2287]
    Gene: SsMTAPII
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2a8yg_
  • Chain 'H':
    Compound: 5'-methylthioadenosine phosphorylase (mtaP)
    Species: Sulfolobus solfataricus [TaxId:2287]
    Gene: SsMTAPII
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2a8yh_
  • Chain 'I':
    Compound: 5'-methylthioadenosine phosphorylase (mtaP)
    Species: Sulfolobus solfataricus [TaxId:2287]
    Gene: SsMTAPII
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2a8yi_
  • Chain 'J':
    Compound: 5'-methylthioadenosine phosphorylase (mtaP)
    Species: Sulfolobus solfataricus [TaxId:2287]
    Gene: SsMTAPII
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2a8yj_
  • Chain 'K':
    Compound: 5'-methylthioadenosine phosphorylase (mtaP)
    Species: Sulfolobus solfataricus [TaxId:2287]
    Gene: SsMTAPII
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2a8yk_
  • Chain 'L':
    Compound: 5'-methylthioadenosine phosphorylase (mtaP)
    Species: Sulfolobus solfataricus [TaxId:2287]
    Gene: SsMTAPII
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2a8yl_
  • Heterogens: SO4, MTA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >2a8yA (A:)
    mieqnekasigiiggsglydpgifseskeikvytpygqpsdfitigkignksvaflprhg
    rghripphkinyraniwalkelgvrwvisvsavgslrmdyklgdfvipdqfidmtknrey
    sffdgpvvahvsmadpfcnslrklaietakelnikthesgtyiciegprfstraesrtwr
    evykadiigmtlvpevnlaceaqmcyatiamvtdydvfaeipvtaeevtrvmaentekak
    kllyaliqklpekpeegscsccnslktalv
    

    Sequence, based on observed residues (ATOM records): (download)
    >2a8yA (A:)
    mieqnekasigiiggsglydpgifseskeikvytpygqpsdfitigkignksvaflprhg
    rghripphkinyraniwalkelgvrwvisvsavgslrmdyklgdfvipdqfidmtknrey
    sffdgpvvahvsmadpfcnslrklaietakelnikthesgtyiciegprfstraesrtwr
    evykadiigmtlvpevnlaceaqmcyatiamvtdydvfaeipvtaeevtrvmaentekak
    kllyaliqklpekpcnslktalv
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >2a8yB (B:)
    mieqnekasigiiggsglydpgifseskeikvytpygqpsdfitigkignksvaflprhg
    rghripphkinyraniwalkelgvrwvisvsavgslrmdyklgdfvipdqfidmtknrey
    sffdgpvvahvsmadpfcnslrklaietakelnikthesgtyiciegprfstraesrtwr
    evykadiigmtlvpevnlaceaqmcyatiamvtdydvfaeipvtaeevtrvmaentekak
    kllyaliqklpekpeegscsccnslktalv
    

    Sequence, based on observed residues (ATOM records): (download)
    >2a8yB (B:)
    mieqnekasigiiggsglydpgifseskeikvytpygqpsdfitigkignksvaflprhg
    rghripphkinyraniwalkelgvrwvisvsavgslrmdyklgdfvipdqfidmtknrey
    sffdgpvvahvsmadpfcnslrklaietakelnikthesgtyiciegprfstraesrtwr
    evykadiigmtlvpevnlaceaqmcyatiamvtdydvfaeipvtaeevtrvmaentekak
    kllyaliqklpekpcnslktalv
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >2a8yC (C:)
    mieqnekasigiiggsglydpgifseskeikvytpygqpsdfitigkignksvaflprhg
    rghripphkinyraniwalkelgvrwvisvsavgslrmdyklgdfvipdqfidmtknrey
    sffdgpvvahvsmadpfcnslrklaietakelnikthesgtyiciegprfstraesrtwr
    evykadiigmtlvpevnlaceaqmcyatiamvtdydvfaeipvtaeevtrvmaentekak
    kllyaliqklpekpeegscsccnslktalv
    

    Sequence, based on observed residues (ATOM records): (download)
    >2a8yC (C:)
    mieqnekasigiiggsglydpgifseskeikvytpygqpsdfitigkignksvaflprhg
    rghripphkinyraniwalkelgvrwvisvsavgslrmdyklgdfvipdqfidmtknrey
    sffdgpvvahvsmadpfcnslrklaietakelnikthesgtyiciegprfstraesrtwr
    evykadiigmtlvpevnlaceaqmcyatiamvtdydvfaeipvtaeevtrvmaentekak
    kllyaliqklpekpcnslktalv
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >2a8yD (D:)
    mieqnekasigiiggsglydpgifseskeikvytpygqpsdfitigkignksvaflprhg
    rghripphkinyraniwalkelgvrwvisvsavgslrmdyklgdfvipdqfidmtknrey
    sffdgpvvahvsmadpfcnslrklaietakelnikthesgtyiciegprfstraesrtwr
    evykadiigmtlvpevnlaceaqmcyatiamvtdydvfaeipvtaeevtrvmaentekak
    kllyaliqklpekpeegscsccnslktalv
    

    Sequence, based on observed residues (ATOM records): (download)
    >2a8yD (D:)
    mieqnekasigiiggsglydpgifseskeikvytpygqpsdfitigkignksvaflprhg
    rghripphkinyraniwalkelgvrwvisvsavgslrmdyklgdfvipdqfidmtknrey
    sffdgpvvahvsmadpfcnslrklaietakelnikthesgtyiciegprfstraesrtwr
    evykadiigmtlvpevnlaceaqmcyatiamvtdydvfaeipvtaeevtrvmaentekak
    kllyaliqklpekpcnslktalv
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >2a8yE (E:)
    mieqnekasigiiggsglydpgifseskeikvytpygqpsdfitigkignksvaflprhg
    rghripphkinyraniwalkelgvrwvisvsavgslrmdyklgdfvipdqfidmtknrey
    sffdgpvvahvsmadpfcnslrklaietakelnikthesgtyiciegprfstraesrtwr
    evykadiigmtlvpevnlaceaqmcyatiamvtdydvfaeipvtaeevtrvmaentekak
    kllyaliqklpekpeegscsccnslktalv
    

    Sequence, based on observed residues (ATOM records): (download)
    >2a8yE (E:)
    mieqnekasigiiggsglydpgifseskeikvytpygqpsdfitigkignksvaflprhg
    rghripphkinyraniwalkelgvrwvisvsavgslrmdyklgdfvipdqfidmtknrey
    sffdgpvvahvsmadpfcnslrklaietakelnikthesgtyiciegprfstraesrtwr
    evykadiigmtlvpevnlaceaqmcyatiamvtdydvfaeipvtaeevtrvmaentekak
    kllyaliqklpekpcnslktalv
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >2a8yF (F:)
    mieqnekasigiiggsglydpgifseskeikvytpygqpsdfitigkignksvaflprhg
    rghripphkinyraniwalkelgvrwvisvsavgslrmdyklgdfvipdqfidmtknrey
    sffdgpvvahvsmadpfcnslrklaietakelnikthesgtyiciegprfstraesrtwr
    evykadiigmtlvpevnlaceaqmcyatiamvtdydvfaeipvtaeevtrvmaentekak
    kllyaliqklpekpeegscsccnslktalv
    

    Sequence, based on observed residues (ATOM records): (download)
    >2a8yF (F:)
    mieqnekasigiiggsglydpgifseskeikvytpygqpsdfitigkignksvaflprhg
    rghripphkinyraniwalkelgvrwvisvsavgslrmdyklgdfvipdqfidmtknrey
    sffdgpvvahvsmadpfcnslrklaietakelnikthesgtyiciegprfstraesrtwr
    evykadiigmtlvpevnlaceaqmcyatiamvtdydvfaeipvtaeevtrvmaentekak
    kllyaliqklpekpcnslktalv
    

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >2a8yG (G:)
    mieqnekasigiiggsglydpgifseskeikvytpygqpsdfitigkignksvaflprhg
    rghripphkinyraniwalkelgvrwvisvsavgslrmdyklgdfvipdqfidmtknrey
    sffdgpvvahvsmadpfcnslrklaietakelnikthesgtyiciegprfstraesrtwr
    evykadiigmtlvpevnlaceaqmcyatiamvtdydvfaeipvtaeevtrvmaentekak
    kllyaliqklpekpeegscsccnslktalv
    

    Sequence, based on observed residues (ATOM records): (download)
    >2a8yG (G:)
    mieqnekasigiiggsglydpgifseskeikvytpygqpsdfitigkignksvaflprhg
    rghripphkinyraniwalkelgvrwvisvsavgslrmdyklgdfvipdqfidmtknrey
    sffdgpvvahvsmadpfcnslrklaietakelnikthesgtyiciegprfstraesrtwr
    evykadiigmtlvpevnlaceaqmcyatiamvtdydvfaeipvtaeevtrvmaentekak
    kllyaliqklpekpcnslktalv
    

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >2a8yH (H:)
    mieqnekasigiiggsglydpgifseskeikvytpygqpsdfitigkignksvaflprhg
    rghripphkinyraniwalkelgvrwvisvsavgslrmdyklgdfvipdqfidmtknrey
    sffdgpvvahvsmadpfcnslrklaietakelnikthesgtyiciegprfstraesrtwr
    evykadiigmtlvpevnlaceaqmcyatiamvtdydvfaeipvtaeevtrvmaentekak
    kllyaliqklpekpeegscsccnslktalv
    

    Sequence, based on observed residues (ATOM records): (download)
    >2a8yH (H:)
    mieqnekasigiiggsglydpgifseskeikvytpygqpsdfitigkignksvaflprhg
    rghripphkinyraniwalkelgvrwvisvsavgslrmdyklgdfvipdqfidmtknrey
    sffdgpvvahvsmadpfcnslrklaietakelnikthesgtyiciegprfstraesrtwr
    evykadiigmtlvpevnlaceaqmcyatiamvtdydvfaeipvtaeevtrvmaentekak
    kllyaliqklpekpcnslktalv
    

  • Chain 'I':
    Sequence, based on SEQRES records: (download)
    >2a8yI (I:)
    mieqnekasigiiggsglydpgifseskeikvytpygqpsdfitigkignksvaflprhg
    rghripphkinyraniwalkelgvrwvisvsavgslrmdyklgdfvipdqfidmtknrey
    sffdgpvvahvsmadpfcnslrklaietakelnikthesgtyiciegprfstraesrtwr
    evykadiigmtlvpevnlaceaqmcyatiamvtdydvfaeipvtaeevtrvmaentekak
    kllyaliqklpekpeegscsccnslktalv
    

    Sequence, based on observed residues (ATOM records): (download)
    >2a8yI (I:)
    mieqnekasigiiggsglydpgifseskeikvytpygqpsdfitigkignksvaflprhg
    rghripphkinyraniwalkelgvrwvisvsavgslrmdyklgdfvipdqfidmtknrey
    sffdgpvvahvsmadpfcnslrklaietakelnikthesgtyiciegprfstraesrtwr
    evykadiigmtlvpevnlaceaqmcyatiamvtdydvfaeipvtaeevtrvmaentekak
    kllyaliqklpekpcnslktalv
    

  • Chain 'J':
    Sequence, based on SEQRES records: (download)
    >2a8yJ (J:)
    mieqnekasigiiggsglydpgifseskeikvytpygqpsdfitigkignksvaflprhg
    rghripphkinyraniwalkelgvrwvisvsavgslrmdyklgdfvipdqfidmtknrey
    sffdgpvvahvsmadpfcnslrklaietakelnikthesgtyiciegprfstraesrtwr
    evykadiigmtlvpevnlaceaqmcyatiamvtdydvfaeipvtaeevtrvmaentekak
    kllyaliqklpekpeegscsccnslktalv
    

    Sequence, based on observed residues (ATOM records): (download)
    >2a8yJ (J:)
    mieqnekasigiiggsglydpgifseskeikvytpygqpsdfitigkignksvaflprhg
    rghripphkinyraniwalkelgvrwvisvsavgslrmdyklgdfvipdqfidmtknrey
    sffdgpvvahvsmadpfcnslrklaietakelnikthesgtyiciegprfstraesrtwr
    evykadiigmtlvpevnlaceaqmcyatiamvtdydvfaeipvtaeevtrvmaentekak
    kllyaliqklpekpcnslktalv
    

  • Chain 'K':
    Sequence, based on SEQRES records: (download)
    >2a8yK (K:)
    mieqnekasigiiggsglydpgifseskeikvytpygqpsdfitigkignksvaflprhg
    rghripphkinyraniwalkelgvrwvisvsavgslrmdyklgdfvipdqfidmtknrey
    sffdgpvvahvsmadpfcnslrklaietakelnikthesgtyiciegprfstraesrtwr
    evykadiigmtlvpevnlaceaqmcyatiamvtdydvfaeipvtaeevtrvmaentekak
    kllyaliqklpekpeegscsccnslktalv
    

    Sequence, based on observed residues (ATOM records): (download)
    >2a8yK (K:)
    mieqnekasigiiggsglydpgifseskeikvytpygqpsdfitigkignksvaflprhg
    rghripphkinyraniwalkelgvrwvisvsavgslrmdyklgdfvipdqfidmtknrey
    sffdgpvvahvsmadpfcnslrklaietakelnikthesgtyiciegprfstraesrtwr
    evykadiigmtlvpevnlaceaqmcyatiamvtdydvfaeipvtaeevtrvmaentekak
    kllyaliqklpekpcnslktalv
    

  • Chain 'L':
    Sequence, based on SEQRES records: (download)
    >2a8yL (L:)
    mieqnekasigiiggsglydpgifseskeikvytpygqpsdfitigkignksvaflprhg
    rghripphkinyraniwalkelgvrwvisvsavgslrmdyklgdfvipdqfidmtknrey
    sffdgpvvahvsmadpfcnslrklaietakelnikthesgtyiciegprfstraesrtwr
    evykadiigmtlvpevnlaceaqmcyatiamvtdydvfaeipvtaeevtrvmaentekak
    kllyaliqklpekpeegscsccnslktalv
    

    Sequence, based on observed residues (ATOM records): (download)
    >2a8yL (L:)
    mieqnekasigiiggsglydpgifseskeikvytpygqpsdfitigkignksvaflprhg
    rghripphkinyraniwalkelgvrwvisvsavgslrmdyklgdfvipdqfidmtknrey
    sffdgpvvahvsmadpfcnslrklaietakelnikthesgtyiciegprfstraesrtwr
    evykadiigmtlvpevnlaceaqmcyatiamvtdydvfaeipvtaeevtrvmaentekak
    kllyaliqklpekpcnslktalv