PDB entry 2a8r

View 2a8r on RCSB PDB site
Description: 2.45 Angstrom Crystal Structure of the Complex Between the Nuclear SnoRNA Decapping Nudix Hydrolase X29 and Manganese in the Presence of 7-methyl-GTP
Class: translation,hydrolase
Keywords: modified nudix hydrolase fold
Deposited on 2005-07-08, released 2006-03-28
The last revision prior to the SCOP 1.73 freeze date was dated 2006-03-28, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.45 Å
R-factor: 0.222
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: U8 snoRNA-binding protein X29
    Species: Xenopus laevis
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q569R2
      • modified residue (119)
      • modified residue (173)
    Domains in SCOP 1.73: d2a8ra1
  • Chain 'B':
    Compound: U8 snoRNA-binding protein X29
    Species: Xenopus laevis
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q569R2
      • modified residue (119)
      • modified residue (173)
    Domains in SCOP 1.73: d2a8rb1
  • Heterogens: MN, POP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >2a8rA (A:)
    maesrspdrgakedkprprnisreeslqlegykhachallhapsqaklfdrvpirrvllm
    mmrfdgrlgfpggfvdtrdisleeglkreleeelgpalatvevteddyrssqvrehpqkc
    vthfyikelkleeierieaeavnakdhglevmglirvplytlrdrvgglpaflcnnfign
    sksqllyalrslkllredqiqevlkashrlqy
    

    Sequence, based on observed residues (ATOM records): (download)
    >2a8rA (A:)
    nisreeslqlegykhachallhapsqaklfdrvpirrvllmmmrfdgrlgfpggfvdtrd
    isleeglkreleeelgpalatvevteddyrssqvrehpqkcvthfyikelkleeieriea
    eavnakdhglevmglirvplytlrdrvgglpaflcnnfignsksqllyalrslkllredq
    iqevlkashr
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >2a8rB (B:)
    maesrspdrgakedkprprnisreeslqlegykhachallhapsqaklfdrvpirrvllm
    mmrfdgrlgfpggfvdtrdisleeglkreleeelgpalatvevteddyrssqvrehpqkc
    vthfyikelkleeierieaeavnakdhglevmglirvplytlrdrvgglpaflcnnfign
    sksqllyalrslkllredqiqevlkashrlqy
    

    Sequence, based on observed residues (ATOM records): (download)
    >2a8rB (B:)
    prnisreeslqlegykhachallhapsqaklfdrvpirrvllmmmrfdgrlgfpggfvdt
    rdisleeglkreleeelgpalatvevteddyrssqvrehpqkcvthfyikelkleeieri
    eaeavnakdhglevmglirvplytlrdrvgglpaflcnnfignsksqllyalrslkllre
    dqiqevlkash