PDB entry 2a6y

View 2a6y on RCSB PDB site
Description: Crystal structure of Emp47p carbohydrate recognition domain (CRD), tetragonal crystal form
Class: sugar binding protein
Keywords: BETA SANDWICH, CARBOHYDRATE BINDING PROTEIN, CARGO RECEPTOR, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, SUGAR BINDING PROTEIN
Deposited on 2005-07-04, released 2006-01-31
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.42 Å
R-factor: 0.134
AEROSPACI score: 0.71 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Emp47p (form1)
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Database cross-references and differences (RAF-indexed):
    • GB CAA60953
    Domains in SCOPe 2.08: d2a6ya1
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >2a6yA (A:)
    gshplgdtsdasklssdyslpdlintrkvpnnwqtgeqasleegrivltsnqnskgslwl
    kqgfdlkdsftmewtfrsvgysgqtdggisfwfvqdsniprdkqlyngpvnydglqllvd
    nngplgptlrgqlndgqkpvdktkiydqsfasclmgyqdssvpstirvtydleddnllkv
    qvdnkvcfqtrkvrfpsgsyrigvtaqngavnnnaesfeifkmqffngviedslipnvna
    mgqpklitkyidqqtg
    

    Sequence, based on observed residues (ATOM records): (download)
    >2a6yA (A:)
    dasklssdyslpdlintrkvpnnwqtgeqasleegrivltsnqnskgslwlkqgfdlkds
    ftmewtfrsvgysgqtdggisfwfvqdsniprdkqlyngpvnydglqllvdnngplgptl
    rgqlndgqkpvdktkiydqsfasclmgyqdssvpstirvtydleddnllkvqvdnkvcfq
    trkvrfpsgsyrigvtaqngavnnnaesfeifkmqffngviedsklitkyi