PDB entry 2a6x

View 2a6x on RCSB PDB site
Description: Crystal structure of Emp46p carbohydrate recognition domain (CRD), Y131F mutant
Class: sugar binding protein
Keywords: BETA SANDWICH, CARBOHYDRATE BINDING PROTEIN, CARGO RECEPTOR, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, SUGAR BINDING PROTEIN
Deposited on 2005-07-04, released 2006-01-31
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.55 Å
R-factor: 0.203
AEROSPACI score: 0.57 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Emp46p
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Database cross-references and differences (RAF-indexed):
    • GB NP_013181
      • engineered (127)
    Domains in SCOPe 2.07: d2a6xa1
  • Chain 'B':
    Compound: Emp46p
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Database cross-references and differences (RAF-indexed):
    • GB NP_013181
      • engineered (127)
    Domains in SCOPe 2.07: d2a6xb_
  • Heterogens: K, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2a6xA (A:)
gsdelkwnkgyslpnllevtdqqkelsqwtlgdkvkleegrfvltpgkntkgslwlkpey
sikdamtiewtfrsfgfrgstkgglafwlkqgnegdstelfggsskkfnglmillrlddk
lgesvtaflndgtkdldiesspyfasclfqyqdsmvpstlrltynpldnhllklqmdnrv
cfqtrkvkfmgsspfrigtsaindaskesfeilkmklydgviedsl

    Sequence, based on observed residues (ATOM records): (download) 
    >2a6xA (A:)
lkwnkgyslpnllevtdqqkelsqwtlgdkvkleegrfvltpgkntkgslwlkpeysikd
amtiewtfrsfgfrgstkgglafwlkqgnegdstelfggsskkfnglmillrlddklges
vtaflndgtkdldiesspyfasclfqyqdsmvpstlrltynpldnhllklqmdnrvcfqt
rkvkfmgsspfrigtsaindaskesfeilkmklydgvi

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2a6xB (B:)
gsdelkwnkgyslpnllevtdqqkelsqwtlgdkvkleegrfvltpgkntkgslwlkpey
sikdamtiewtfrsfgfrgstkgglafwlkqgnegdstelfggsskkfnglmillrlddk
lgesvtaflndgtkdldiesspyfasclfqyqdsmvpstlrltynpldnhllklqmdnrv
cfqtrkvkfmgsspfrigtsaindaskesfeilkmklydgviedsl

    Sequence, based on observed residues (ATOM records): (download) 
    >2a6xB (B:)
lkwnkgyslpnllevtdqqkelsqwtlgdkvkleegrfvltpgkntkgslwlkpeysikd
amtiewtfrsfgfrgstkgglafwlkqgnegdstelfggsskkfnglmillrlddklges
vtaflndgtkdldiesspyfasclfqyqdsmvpstlrltynpldnhllklqmdnrvcfqt
rkvkfmgsspfrigtsaindaskesfeilkmklydgvie